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Protein
Submitted name:

RNA exonuclease 5

Gene

Rexo5

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
RNA exonuclease 5Imported
Gene namesi
Name:Rexo5Imported
Synonyms:ExnefImported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 1

Organism-specific databases

RGDi1305412 Rexo5

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSRNOG00000014513
ExpressionAtlasiA0A0G2K6L8 baseline and differential

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini507 – 581RRMInterPro annotationAdd BLAST75
Domaini602 – 672RRMInterPro annotationAdd BLAST71

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili580 – 600Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

GeneTreeiENSGT00920000149175
OMAiKPSWCQL

Family and domain databases

CDDicd06145 REX1_like, 1 hit
Gene3Di3.30.420.10, 1 hit
3.30.70.330, 2 hits
InterProiView protein in InterPro
IPR013520 Exonuclease_RNaseT/DNA_pol3
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR034922 REX1-like_exo
IPR012337 RNaseH-like_sf
IPR036397 RNaseH_sf
IPR000504 RRM_dom
PfamiView protein in Pfam
PF00929 RNase_T, 1 hit
PF00076 RRM_1, 1 hit
SMARTiView protein in SMART
SM00479 EXOIII, 1 hit
SM00360 RRM, 2 hits
SUPFAMiSSF53098 SSF53098, 1 hit
SSF54928 SSF54928, 1 hit
PROSITEiView protein in PROSITE
PS50102 RRM, 2 hits

Sequencei

Sequence statusi: Complete.

A0A0G2K6L8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MELEEEENPR KRKETPNSAL TTELDRPSWD VQDPEPQAKK ARLSTILFTD
60 70 80 90 100
NCEVTHRQLC ELLKYAILGK STLPKPSWCQ LLHQKQLNNV VVFILKGMSQ
110 120 130 140 150
LHFYRFYLEF RFLRKTFRHK FSLPPPTSSF LFDIIGLQKK KSARGCPRTV
160 170 180 190 200
EGPLISATLK SSIDLQNDPI IQKYGYKNVS LTRCLLTKEE MKTFHFPLQG
210 220 230 240 250
SPNCENFILL KYSGFITDSS PLFGLDCEVC LTSMGKELTR ISLVAEGGYC
260 270 280 290 300
LMDELVKPDF KILDYLTSFS GITKEILNPV TTKLKDVQKL LRELLPPDAV
310 320 330 340 350
LVGHCLDLDL RVLKIIHPYV IDTSLLYIGK QGRRFKLTFL AKVILGKDIQ
360 370 380 390 400
CPNKLGHDGI EDARTALELV QYFLKYGPKK IAEFNLEALA ANQEQGNKEG
410 420 430 440 450
ATHMRSVLEC LDSMGQKLLF LTQDIDELSS YRNCQTVKCS SNKEVLEQAR
460 470 480 490 500
VEVPLFPFNI VQFSFRPFPP LFAEEMKNNA GLIQRSFYLC LPSMPTSVMK
510 520 530 540 550
TRWTEMSTIY AGPFSKDCNV GSLKKVFSSL GPVQSITLVL ETYRPYFSIQ
560 570 580 590 600
YELLEAAQLA IETMNGTILE GSCIRVHRLL TELTLECDTL VRELEQDSEN
610 620 630 640 650
QGTIYVAGIG ETFKEHLLEQ SNLFPDLEAV ILPKELKSRK QKNYCFLKFK
660 670 680 690 700
TFNSAQVALE VLKGKDWKLK GRNALTSRHL QAWLKNIHPE PSMPMGLRIV
710 720 730 740 750
PPLLERHIFR HLWIPPWPRT DENKRGRGRR HPAVRVTDEV SPGPQLQTEE
760 770 780 790 800
MDLAHKPRRI LHTVSFQLML PPFGNQSCQL GLLQNTHSIH TCVCTLFLPH
810 820 830 840
PSRQPMLSCQ DSCPRSSLRE KAAQEDFTEL SLGFEFLSLY WDCSEY
Length:846
Mass (Da):96,770
Last modified:July 22, 2015 - v1
Checksum:iA6A253B4A1F28E01
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07005591 Genomic DNA No translation available.
AABR07005592 Genomic DNA No translation available.
RefSeqiXP_017444715.1, XM_017589226.1
UniGeneiRn.203990

Genome annotation databases

EnsembliENSRNOT00000083153; ENSRNOP00000073863; ENSRNOG00000014513
GeneIDi309036

Similar proteinsi

Entry informationi

Entry nameiA0A0G2K6L8_RAT
AccessioniPrimary (citable) accession number: A0A0G2K6L8
Entry historyiIntegrated into UniProtKB/TrEMBL: July 22, 2015
Last sequence update: July 22, 2015
Last modified: June 20, 2018
This is version 26 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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