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Protein
Submitted name:

THAP domain containing 6 (Predicted), isoform CRA_b

Gene

Thap6

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotation
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
THAP domain containing 6 (Predicted), isoform CRA_bImported
Submitted name:
THAP domain-containing 6Imported
Gene namesi
Name:Thap6Imported
Synonyms:Thap6_predictedImported
ORF Names:rCG_60504Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 14

Organism-specific databases

RGDi1310094 Thap6

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSRNOG00000058724 Expressed in 9 organ(s), highest expression level in skeletal muscle tissue

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 89THAP-typeInterPro annotationAdd BLAST89

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

GeneTreeiENSGT00530000063390
OMAiRLEAFCW

Family and domain databases

Gene3Di3.30.40.180, 1 hit
InterProiView protein in InterPro
IPR006612 THAP_Znf
IPR038441 THAP_Znf_sf
PfamiView protein in Pfam
PF05485 THAP, 1 hit
SMARTiView protein in SMART
SM00692 DM3, 1 hit
SM00980 THAP, 1 hit
PROSITEiView protein in PROSITE
PS50950 ZF_THAP, 1 hit

Sequencei

Sequence statusi: Complete.

A0A0G2K0Q4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MVKCCSAIGC ASRCLPNSKL KGLTFHVFPT DENIKRKWVL AMKRLDVNTA
60 70 80 90 100
GIWEPKKGDV LCSRHFKKTD FDRSTPNTKL KPGAIPSVFE SPCHLQEKRE
110 120 130 140 150
KLHCRKNFIL KTLPVSNRGH QLVGASCIAE FQPQLIFEHS YSVMDSPKKL
160 170 180 190 200
KHKLDLVIIE LENTKESLQN VLDREKHFQK SLRKTIRELK DESLISQETA
210
SRLDAFCWEC CQESTA
Length:216
Mass (Da):24,769
Last modified:July 22, 2015 - v1
Checksum:iE3DA9CD903E0279E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC136013 Genomic DNA No translation available.
CH474060 Genomic DNA Translation: EDL88596.1
RefSeqiNP_001100679.1, NM_001107209.2
XP_017454663.1, XM_017599174.1
UniGeneiRn.222309

Genome annotation databases

EnsembliENSRNOT00000090938; ENSRNOP00000071541; ENSRNOG00000058724
GeneIDi305244
KEGGirno:305244

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC136013 Genomic DNA No translation available.
CH474060 Genomic DNA Translation: EDL88596.1
RefSeqiNP_001100679.1, NM_001107209.2
XP_017454663.1, XM_017599174.1
UniGeneiRn.222309

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000090938; ENSRNOP00000071541; ENSRNOG00000058724
GeneIDi305244
KEGGirno:305244

Organism-specific databases

CTDi152815
RGDi1310094 Thap6

Phylogenomic databases

GeneTreeiENSGT00530000063390
OMAiRLEAFCW

Gene expression databases

BgeeiENSRNOG00000058724 Expressed in 9 organ(s), highest expression level in skeletal muscle tissue

Family and domain databases

Gene3Di3.30.40.180, 1 hit
InterProiView protein in InterPro
IPR006612 THAP_Znf
IPR038441 THAP_Znf_sf
PfamiView protein in Pfam
PF05485 THAP, 1 hit
SMARTiView protein in SMART
SM00692 DM3, 1 hit
SM00980 THAP, 1 hit
PROSITEiView protein in PROSITE
PS50950 ZF_THAP, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A0G2K0Q4_RAT
AccessioniPrimary (citable) accession number: A0A0G2K0Q4
Entry historyiIntegrated into UniProtKB/TrEMBL: July 22, 2015
Last sequence update: July 22, 2015
Last modified: September 12, 2018
This is version 18 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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