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Entry version 23 (16 Jan 2019)
Sequence version 1 (22 Jul 2015)
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Protein
Submitted name:

Similar to hypothetical protein A530094D01

Gene

RGD1306556

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Similar to hypothetical protein A530094D01Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:RGD1306556Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiRattus norvegicus (Rat)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10116 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000002494 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 12

Organism-specific databases

Rat genome database

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RGDi
1306556 RGD1306556

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

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PaxDbi
A0A0G2JZ88

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

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Bgeei
ENSRNOG00000052424 Expressed in 9 organ(s), highest expression level in Ammon's horn

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini1592 – 1761Tankyrase_bdg_CInterPro annotationAdd BLAST170

Phylogenomic databases

Ensembl GeneTree

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GeneTreei
ENSGT00940000154184

Identification of Orthologs from Complete Genome Data

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OMAi
PKATFFA

Database of Orthologous Groups

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OrthoDBi
490894at2759

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR032764 Tankyrase-bd_C
IPR040006 TNKS1BP1-like

The PANTHER Classification System

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PANTHERi
PTHR22042 PTHR22042, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF15327 Tankyrase_bdg_C, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM01319 Tankyrase_bdg_C, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A0A0G2JZ88-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MATRVEVGSI ASLRAGPAGL GDIGREETLK RTYFCQTGDL PGASSTRIRS
60 70 80 90 100
AKNPLQAHLF PLPIAPKPFL KDQVPERKAS VKSSWSGGAT QPRPSAQAAE
110 120 130 140 150
EEAKEDLAKT MPSLAGEGAD RGEALQNGPS VPNKATFLRS GPSTMGLFET
160 170 180 190 200
TKAGPGLGKG TGEGSREASP RATQTSPLSA RPEVATKPAL PARKPPVTLP
210 220 230 240 250
RPTSLSQDTG SAISQGEAGR AQPLPKAHSV EDPADQAPEA KPVRRRPLSA
260 270 280 290 300
VFSEYLQPLK PGSGGVAVTG KVPPTPPEKT WVRKPRPLSV DLTSIFESGD
310 320 330 340 350
TLLRKVTREQ STAERQGPER PGVEPRGNVE SPARVDGTPR DPDAEFQELS
360 370 380 390 400
KRLHARKEKM VLKQTDTDSP RAPRARATPG DDQSPQQEEA MPEQQWEKVQ
410 420 430 440 450
ESPSPRPERG LGLTEVKGER LDQEASARTE RKPAGSVRKR FSLFGEDSAG
460 470 480 490 500
ALAVVPEPSP VTPESPSSAS TVSTASTVPE PSRAGVNVQA RIKGWSVERA
510 520 530 540 550
GEEKPEVWRR ASQARPLPAD LTKPFSRSAS SSEIGYEKCA TLGGELPGER
560 570 580 590 600
REKLKERHGL DRPSATKSPW KSEASQKSRQ TELKDASDQD PDRCWSARSV
610 620 630 640 650
GGASPSEVSP EDDGSFQKVW ATVFEHHVER HTVADQAGCC LSATPPFDVA
660 670 680 690 700
DTPDPRPKPE NWPGKEPPGV TDERDRSRWS DRADLGMLGR PALVDVALRP
710 720 730 740 750
YPTPVPGRHP MEERHSRSVP RHLESPPVSQ RVQPKYDVMH ASGERAHSEA
760 770 780 790 800
VSTVPEEKAV TLHSGRSRLS LPARQLSQEV NPSYLDSSLQ GSGGAVQRAS
810 820 830 840 850
QLWEARGKEG SRSKLDCQQP GDGFGGSCQS SKWAGVGVTN WHSSAVVSKD
860 870 880 890 900
LGTAQRGQSW SVFSDLPSRA SIEPRDSQVQ AGIDSLSQQK GPLMVASEDN
910 920 930 940 950
PRLAQVAQPE VRMWRSNPSE PRVDRLRRRT LPHDVKFDPF SLLGPESSSE
960 970 980 990 1000
RQQRPADGLT FPTCALKRPH QQAQTQGGTP DASQGRTFLV EKLGPSAEPA
1010 1020 1030 1040 1050
ATFFAVTYQV PDIQKAKSVV KPGPENVSEP SRKTPPPPSP RSVVSALPSP
1060 1070 1080 1090 1100
GREELWSPAS SKGYAKGREY EEVRNLSKHP KSTDQPASAG DRTLDPSRER
1110 1120 1130 1140 1150
IIDVDALRFH RESEDDAVKY RNLGASSGED ASQTPLVLRR PRSLLMRRRT
1160 1170 1180 1190 1200
EVISETFPGK MRDGYRSSVL DLDSLMAEYK EQLSRSPSKA QEQQDSPTEP
1210 1220 1230 1240 1250
SGSPQERSGW PKEAEWRRRS LKEAPQSDGV GVGQQTGPSV KVLHSPGPSK
1260 1270 1280 1290 1300
QPAEPLGVAM ATKSGLPLWA PPQSASGENC PSPSSVPAGS RRKSPGIAEL
1310 1320 1330 1340 1350
ESKPSSSEHQ GTKRRQGSVK SQELGSGDPV SPRSPPSDRK KGTPRRSTVQ
1360 1370 1380 1390 1400
GVEGNGVQWG TPPHDSVWSP MDIKRACSEK GPPARVREGL SVMQDARERR
1410 1420 1430 1440 1450
GEQSRGKPDL PAETPKVAEG PCQRDTRRLE GPKLPLQNLE RRDGRQDGQQ
1460 1470 1480 1490 1500
PLGQVSPVAS VPRRSHSFCK DKRNSLLVNQ LKQCFSRRAP EAKDTDTLVQ
1510 1520 1530 1540 1550
EADSQYGTWA AQHQNGGSFG PETPSPDSSA ASAGKQPPGS HLSSYTESTS
1560 1570 1580 1590 1600
VEQHDSSRDR RSSSVDRSSS ELESTDGPEG PPPSDVCPAE GEDDFSFIHQ
1610 1620 1630 1640 1650
TSVLDSSALK TRVQLSKRSR RRAPISHSLR RSQFSESESR SPLEEESHSA
1660 1670 1680 1690 1700
WMFKDSTEEK SPRRDESDEE PPRVERTPVG HPQRMPVFPG MDPAVLKAQL
1710 1720 1730 1740 1750
PKRSEVDSPG ESLSWTPQPK TPKSPFQPGV LGSRVLPSSA EREERSEERS
1760 1770
PQWLKELKSK KRQSLYENQA
Length:1,770
Mass (Da):192,411
Last modified:July 22, 2015 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iFA3EDF3ABE4CA628
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

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DDBJi
Links Updated
AABR07036608 Genomic DNA No translation available.
AABR07036609 Genomic DNA No translation available.

NCBI Reference Sequences

More...
RefSeqi
XP_017454035.1, XM_017598546.1
XP_017454036.1, XM_017598547.1
XP_017454037.1, XM_017598548.1
XP_017454038.1, XM_017598549.1
XP_017459997.1, XM_017604508.1
XP_017459998.1, XM_017604509.1
XP_017459999.1, XM_017604510.1
XP_017460000.1, XM_017604511.1

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSRNOT00000082998; ENSRNOP00000070952; ENSRNOG00000052424

Database of genes from NCBI RefSeq genomes

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GeneIDi
288744

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07036608 Genomic DNA No translation available.
AABR07036609 Genomic DNA No translation available.
RefSeqiXP_017454035.1, XM_017598546.1
XP_017454036.1, XM_017598547.1
XP_017454037.1, XM_017598548.1
XP_017454038.1, XM_017598549.1
XP_017459997.1, XM_017604508.1
XP_017459998.1, XM_017604509.1
XP_017459999.1, XM_017604510.1
XP_017460000.1, XM_017604511.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

Proteomic databases

PaxDbiA0A0G2JZ88

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000082998; ENSRNOP00000070952; ENSRNOG00000052424
GeneIDi288744

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
288744
RGDi1306556 RGD1306556

Phylogenomic databases

GeneTreeiENSGT00940000154184
OMAiPKATFFA
OrthoDBi490894at2759

Gene expression databases

BgeeiENSRNOG00000052424 Expressed in 9 organ(s), highest expression level in Ammon's horn

Family and domain databases

InterProiView protein in InterPro
IPR032764 Tankyrase-bd_C
IPR040006 TNKS1BP1-like
PANTHERiPTHR22042 PTHR22042, 1 hit
PfamiView protein in Pfam
PF15327 Tankyrase_bdg_C, 1 hit
SMARTiView protein in SMART
SM01319 Tankyrase_bdg_C, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A0G2JZ88_RAT
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A0G2JZ88
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: July 22, 2015
Last sequence update: July 22, 2015
Last modified: January 16, 2019
This is version 23 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
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