Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Sterile alpha motif domain-containing 9

Gene

Samd9

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Sterile alpha motif domain-containing 9Imported
Gene namesi
Name:Samd9Imported
Synonyms:RGD1563091Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 4

Organism-specific databases

RGDi1563091 Samd9

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSRNOG00000052444 Expressed in 9 organ(s), highest expression level in spleen

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini14 – 60SAMInterPro annotationAdd BLAST47

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili95 – 115Sequence analysisAdd BLAST21
Coiled coili365 – 385Sequence analysisAdd BLAST21
Coiled coili1447 – 1467Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

GeneTreeiENSGT00390000013973
OMAiCAFYQDL

Family and domain databases

Gene3Di1.25.40.10, 1 hit
InterProiView protein in InterPro
IPR027417 P-loop_NTPase
IPR001660 SAM
IPR013761 SAM/pointed_sf
IPR011990 TPR-like_helical_dom_sf
PfamiView protein in Pfam
PF00536 SAM_1, 1 hit
SMARTiView protein in SMART
SM00454 SAM, 1 hit
SUPFAMiSSF47769 SSF47769, 1 hit
SSF52540 SSF52540, 1 hit
PROSITEiView protein in PROSITE
PS50105 SAM_DOMAIN, 1 hit

Sequencei

Sequence statusi: Complete.

A0A0G2JVW6-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAETLNLPKN TDDWTKEDVN LWLESHRIDQ KHREILMAQD VSGVVLKWLN
60 70 80 90 100
KKNLVEMGIT HGPAIQIEEL FKELQKTPKE NLTKTCKKTK GRKNIPKTQT
110 120 130 140 150
ESRETSNQNQ RAEENSCKAD TSAVSPEGNS QRTAASPEAK GSKSEKNDLV
160 170 180 190 200
EDKAVQQDKQ ASPGPTCIAY PFNEFSNPYR YKLHFILQPE TGPLNLIDPV
210 220 230 240 250
HEFKALTNTE TATEEDIKMK FSNEVFRFAS ACMNSRTNGT IHFGVQDKPQ
260 270 280 290 300
GRIVGMELTT VTKDALIDHF NLMIVQYFEV HQVQQAKKCI REPRFVEVLL
310 320 330 340 350
PNSTPSNKFV IEVDIIPQYS ECKEDFFQIK MHWHKDETWQ QIPKYSVFVR
360 370 380 390 400
DGPKSKDIIG NKADFKAFKL DLKALADSRK EAEKKSKVKS DGSNSQGQKL
410 420 430 440 450
IDLLTGNKDL LDNSHYEWYI LVTNKCHPDQ TKHLDFLKEI KWFAVLEFDP
460 470 480 490 500
ESESNGVVKA FKGSRVANLH FPSLFIEEKP TVSEKISSLN LYQQPSWIFC
510 520 530 540 550
NGRLDLESDK YQPLDPISWQ RERASEVRRL ISFLTRDDIM PRGKFLVVFL
560 570 580 590 600
LLSSVEDPRD PLIETFCAFY QDLNGMENIL CICVHPHIYQ VWKDLLEVRL
610 620 630 640 650
SSQQDELSSQ SIFSLNLAEI NGTILKLKSL TQSSKRFLPS VGSSTVLLKR
660 670 680 690 700
EEEIMTALEI LCENECEGTL LEKDREKLFE FKTSKEKDFY RGGKVSWWNF
710 720 730 740 750
YFSSENYSSS FVKRDKYVKL EKKIQEWADS SQPVCAKIIH LYHHPGCGGT
760 770 780 790 800
TLAMHILWEL RKKFRCAVLK NKTEDFSEIG EQVTNLITYG ATNHQEYLPV
810 820 830 840 850
LLLVDDFEEQ DNVYLLQTSI QTAVAKKHIR YEKPLVIILN CTRSQNPEKS
860 870 880 890 900
AKNPDSVALV QQLSDKEQRA FELKLTEIKE QHKNVEDFYS FMIMKTNFNK
910 920 930 940 950
EYIENVVRNI LKGQNVTTKE AKLFAFLALL NAFVPDTTIS LSQCELFLGI
960 970 980 990 1000
SNKKAYWGTE KFEDKMGTYS TILIKSEVIE CGSYCGVRII HHLIATLSLE
1010 1020 1030 1040 1050
ELKRSYNLSK SKIVMDMLTE NLFYDTGIGK SKFYQDMQTL LITRQRNEHE
1060 1070 1080 1090 1100
RETGNWFSPF IEALHKDEGN DAVKAVLHEA TRRFDPNAFI CQALARHFYL
1110 1120 1130 1140 1150
KEKDFESALL WAKQARKIAP NNSYISDTLG QVYKSKLRWW VEDNIKNGII
1160 1170 1180 1190 1200
SVDELTELLD LAKHASEAFK DSQQQTEDRE YEGKESVYQK SKRRYDTYNI
1210 1220 1230 1240 1250
AGYQGEIEVG LYTIQILKLL PFFNSKNELS RQVMINFISG NCDIPGDLNE
1260 1270 1280 1290 1300
FKSVLKNFIS YLTNLQSSLK KSFDFFDDYF VLLKPRNNIE QYEEAKSRRK
1310 1320 1330 1340 1350
VAMYFKKYVE IFGPLAELQN QNFRSKLSLP LQVERTRRSL EALKADKFSG
1360 1370 1380 1390 1400
LLEYLIKSPK DTVSSMEDIV NKYTFLLEQC AIKIQQKEKQ NFILASIILS
1410 1420 1430 1440 1450
CINPISKFVK PIKKLKEQLR EILQPIGLTY QFSEPYFLAS LLFWPENQQL
1460 1470 1480 1490 1500
DQDSKQMEKY AQALEKSFRG QYKRLYRTKQ PIAYFFLGKG NSRNRLIHKG
1510 1520 1530 1540 1550
KIDENFENLS DINSWWHTGK VWEEKKVQDL LVRLPGRAEN NCLYIEYGIN
1560 1570 1580 1590
EKITIPIKPT HFGQLRSGRS IEKVSFYLGF SIGGLLAYDI KIV
Length:1,593
Mass (Da):184,501
Last modified:July 22, 2015 - v1
Checksum:i1B39A01546A755E5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07059632 Genomic DNA No translation available.
RefSeqiXP_001069221.1, XM_001069221.5
XP_006224885.1, XM_006224823.3
XP_006236141.1, XM_006236079.3
XP_575365.2, XM_575365.6
UniGeneiRn.227274

Genome annotation databases

EnsembliENSRNOT00000084021; ENSRNOP00000069645; ENSRNOG00000052444
GeneIDi500011
KEGGirno:500011

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07059632 Genomic DNA No translation available.
RefSeqiXP_001069221.1, XM_001069221.5
XP_006224885.1, XM_006224823.3
XP_006236141.1, XM_006236079.3
XP_575365.2, XM_575365.6
UniGeneiRn.227274

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000084021; ENSRNOP00000069645; ENSRNOG00000052444
GeneIDi500011
KEGGirno:500011

Organism-specific databases

CTDi54809
RGDi1563091 Samd9

Phylogenomic databases

GeneTreeiENSGT00390000013973
OMAiCAFYQDL

Gene expression databases

BgeeiENSRNOG00000052444 Expressed in 9 organ(s), highest expression level in spleen

Family and domain databases

Gene3Di1.25.40.10, 1 hit
InterProiView protein in InterPro
IPR027417 P-loop_NTPase
IPR001660 SAM
IPR013761 SAM/pointed_sf
IPR011990 TPR-like_helical_dom_sf
PfamiView protein in Pfam
PF00536 SAM_1, 1 hit
SMARTiView protein in SMART
SM00454 SAM, 1 hit
SUPFAMiSSF47769 SSF47769, 1 hit
SSF52540 SSF52540, 1 hit
PROSITEiView protein in PROSITE
PS50105 SAM_DOMAIN, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A0G2JVW6_RAT
AccessioniPrimary (citable) accession number: A0A0G2JVW6
Entry historyiIntegrated into UniProtKB/TrEMBL: July 22, 2015
Last sequence update: July 22, 2015
Last modified: November 7, 2018
This is version 23 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again