UniProtKB - A0A0G2JFE0 (A0A0G2JFE0_MOUSE)
Protein
Submitted name:
Tudor and KH domain-containing protein
Gene
Tdrkh
Organism
Mus musculus (Mouse)
Status
Names & Taxonomyi
Protein namesi | Submitted name: Tudor and KH domain-containing proteinImported |
Gene namesi | Name:TdrkhImported |
Organismi | Mus musculus (Mouse)Imported |
Taxonomic identifieri | 10090 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Myomorpha › Muroidea › Muridae › Murinae › Mus › Mus |
Proteomesi |
|
Organism-specific databases
MGIi | MGI:1919884, Tdrkh |
Subcellular locationi
Other locations
- integral component of membrane Source: UniProtKB-KW
Topology
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Transmembranei | 17 – 34 | HelicalSequence analysisAdd BLAST | 18 |
Keywords - Cellular componenti
MembraneExpressioni
Gene expression databases
Bgeei | ENSMUSG00000041912, Expressed in primary oocyte and 200 other tissues |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 308 – 367 | TudorInterPro annotationAdd BLAST | 60 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 166 – 185 | DisorderedSequence analysisAdd BLAST | 20 | |
Regioni | 223 – 246 | DisorderedSequence analysisAdd BLAST | 24 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 166 – 183 | PolyampholyteSequence analysisAdd BLAST | 18 | |
Compositional biasi | 230 – 246 | PolarSequence analysisAdd BLAST | 17 |
Keywords - Domaini
Transmembrane, Transmembrane helixSequence analysisPhylogenomic databases
GeneTreei | ENSGT00940000159364 |
Family and domain databases
Gene3Di | 2.40.50.90, 1 hit 3.30.1370.10, 2 hits |
InterProi | View protein in InterPro IPR004087, KH_dom IPR004088, KH_dom_type_1 IPR036612, KH_dom_type_1_sf IPR035437, SNase_OB-fold_sf IPR002999, Tudor |
Pfami | View protein in Pfam PF00013, KH_1, 1 hit PF00567, TUDOR, 1 hit |
SMARTi | View protein in SMART SM00322, KH, 1 hit SM00333, TUDOR, 1 hit |
SUPFAMi | SSF54791, SSF54791, 1 hit |
PROSITEi | View protein in PROSITE PS50304, TUDOR, 1 hit |
(1+)i Sequence
Sequence statusi: Complete.
This entry has 1 described isoform and 5 potential isoforms that are computationally mapped.Show allAlign All
A0A0G2JFE0-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MSTERTSWTN LSTIQKIALG LGIPASATVA YILYRRYRES REERLTFVGE
60 70 80 90 100
DDIEIEMRVP QEAVKLIIGR QGANIKQLRK QTGARIDVDT EDVGDERVLL
110 120 130 140 150
ISGFPVQASG AKITCDKESE GTLLLSRLIK ISGTQKEVAA AKHLILEKVS
160 170 180 190 200
EDEELRKRIA HSAETRVPRK QPISVRREEV TEPGGAGEAA LWKNTNSSMG
210 220 230 240 250
PATPLEVPLR KGGGDMVVVG PKEGSWEKPN DDSFQNSGAQ SSPETSMFEI
260 270 280 290 300
PSPDFSFHAD EYLEVYVSAS EHPNHFWIQI IGSRSLQLDK LVSEMTQHYE
310 320 330 340 350
NSLPEDLTVH VGDIVAAPLS TNGSWYRARV LGTLENGNLD LYFVDFGDNG
360 370 380 390 400
DCALKDLRAL RSDFLSLPFQ AIECSLARIA PTGEEWEEEA LDEFDRLTHC
410 420 430 440 450
ADWKPLVAKI SSYVQTGIST WPKIYLYDTS DEKKLDIGLE LVRKGYAVEL
460 470 480 490 500
PEDMEENRTV PNMLKDMATE TDDSLASILT ETKKSPEEMP HTLSCLSLSE
510
AASMSGDDNL EDDLF
Computationally mapped potential isoform sequencesi
There are 5 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basketQ80VL1 | TDRKH_MOUSE | Tudor and KH domain-containing prot... | Tdrkh Tdrd2 | 560 | Annotation score: | ||
A0A0G2JFB2 | A0A0G2JFB2_MOUSE | Tudor and KH domain-containing prot... | Tdrkh | 556 | Annotation score: | ||
A0A0G2JE08 | A0A0G2JE08_MOUSE | Tudor and KH domain-containing prot... | Tdrkh | 296 | Annotation score: | ||
A0A0G2JFP5 | A0A0G2JFP5_MOUSE | Tudor and KH domain-containing prot... | Tdrkh | 140 | Annotation score: | ||
A0A0G2JEH9 | A0A0G2JEH9_MOUSE | Tudor and KH domain-containing prot... | Tdrkh | 50 | Annotation score: |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AC122808 Genomic DNA No translation available. |
Genome annotation databases
Ensembli | ENSMUST00000197495; ENSMUSP00000143135; ENSMUSG00000041912 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AC122808 Genomic DNA No translation available. |
3D structure databases
SMRi | A0A0G2JFE0 |
ModBasei | Search... |
Protocols and materials databases
Antibodypediai | 10583, 69 antibodies |
Genome annotation databases
Ensembli | ENSMUST00000197495; ENSMUSP00000143135; ENSMUSG00000041912 |
Organism-specific databases
MGIi | MGI:1919884, Tdrkh |
Phylogenomic databases
GeneTreei | ENSGT00940000159364 |
Miscellaneous databases
ChiTaRSi | Tdrkh, mouse |
SOURCEi | Search... |
Gene expression databases
Bgeei | ENSMUSG00000041912, Expressed in primary oocyte and 200 other tissues |
Family and domain databases
Gene3Di | 2.40.50.90, 1 hit 3.30.1370.10, 2 hits |
InterProi | View protein in InterPro IPR004087, KH_dom IPR004088, KH_dom_type_1 IPR036612, KH_dom_type_1_sf IPR035437, SNase_OB-fold_sf IPR002999, Tudor |
Pfami | View protein in Pfam PF00013, KH_1, 1 hit PF00567, TUDOR, 1 hit |
SMARTi | View protein in SMART SM00322, KH, 1 hit SM00333, TUDOR, 1 hit |
SUPFAMi | SSF54791, SSF54791, 1 hit |
PROSITEi | View protein in PROSITE PS50304, TUDOR, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | A0A0G2JFE0_MOUSE | |
Accessioni | A0A0G2JFE0Primary (citable) accession number: A0A0G2JFE0 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | July 22, 2015 |
Last sequence update: | July 22, 2015 | |
Last modified: | August 12, 2020 | |
This is version 31 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |