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Protein
Submitted name:

DNA-binding protein RFXANK

Gene

EH28_00644

Organism
Larimichthys crocea (Large yellow croaker) (Pseudosciaena crocea)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionDNA-bindingImported

Names & Taxonomyi

Protein namesi
Submitted name:
DNA-binding protein RFXANKImported
Gene namesi
ORF Names:EH28_00644Imported
OrganismiLarimichthys crocea (Large yellow croaker) (Pseudosciaena crocea)Imported
Taxonomic identifieri215358 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataEupercariaSciaenidaeLarimichthys
Proteomesi
  • UP000054355 Componenti: Unassembled WGS sequence

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini66 – 219ANK_REP_REGIONInterPro annotationAdd BLAST154
Repeati100 – 132ANKPROSITE-ProRule annotationAdd BLAST33
Repeati133 – 165ANKPROSITE-ProRule annotationAdd BLAST33
Repeati166 – 198ANKPROSITE-ProRule annotationAdd BLAST33

Keywords - Domaini

ANK repeatPROSITE-ProRule annotation

Phylogenomic databases

KOiK08062

Family and domain databases

CDDicd00204 ANK, 1 hit
Gene3Di1.25.40.20, 1 hit
InterProiView protein in InterPro
IPR002110 Ankyrin_rpt
IPR020683 Ankyrin_rpt-contain_dom
IPR036770 Ankyrin_rpt-contain_sf
PfamiView protein in Pfam
PF12796 Ank_2, 2 hits
PRINTSiPR01415 ANKYRIN
SMARTiView protein in SMART
SM00248 ANK, 4 hits
SUPFAMiSSF48403 SSF48403, 1 hit
PROSITEiView protein in PROSITE
PS50297 ANK_REP_REGION, 1 hit
PS50088 ANK_REPEAT, 3 hits

Sequencei

Sequence statusi: Complete.

A0A0F8AH41-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEAGGDEEFA DGQNIQSSNA DVCPSEPRDE RSNENMDVDE EGLFKHSTTL
60 70 80 90 100
TNKQRGNEVT VRPATLDSLS IHQLAAQGDV TQVAAHLCKD SSLLSRQDER
110 120 130 140 150
GFTPLMWAAA FGEKAVVDYL LEKGADPNAI ARERESALTL ASSGGYVDIV
160 170 180 190 200
ESLLRHGVDI NTYDWNGGTP LLYAVRGNHI KCVEALLANG ADMTIESDSG
210 220 230
YSPMALAVAL GHKKIQKVLE GHILKLYKPP T
Length:231
Mass (Da):24,995
Last modified:July 22, 2015 - v1
Checksum:iCFF68AE3418CA106
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KQ042047 Genomic DNA Translation: KKF19335.1
RefSeqiXP_010728918.1, XM_010730616.2

Genome annotation databases

GeneIDi104918765
KEGGilco:104918765

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KQ042047 Genomic DNA Translation: KKF19335.1
RefSeqiXP_010728918.1, XM_010730616.2

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi104918765
KEGGilco:104918765

Organism-specific databases

CTDi8625

Phylogenomic databases

KOiK08062

Family and domain databases

CDDicd00204 ANK, 1 hit
Gene3Di1.25.40.20, 1 hit
InterProiView protein in InterPro
IPR002110 Ankyrin_rpt
IPR020683 Ankyrin_rpt-contain_dom
IPR036770 Ankyrin_rpt-contain_sf
PfamiView protein in Pfam
PF12796 Ank_2, 2 hits
PRINTSiPR01415 ANKYRIN
SMARTiView protein in SMART
SM00248 ANK, 4 hits
SUPFAMiSSF48403 SSF48403, 1 hit
PROSITEiView protein in PROSITE
PS50297 ANK_REP_REGION, 1 hit
PS50088 ANK_REPEAT, 3 hits
ProtoNetiSearch...

Entry informationi

Entry nameiA0A0F8AH41_LARCR
AccessioniPrimary (citable) accession number: A0A0F8AH41
Entry historyiIntegrated into UniProtKB/TrEMBL: July 22, 2015
Last sequence update: July 22, 2015
Last modified: February 28, 2018
This is version 16 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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