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Protein

Succinate dehydrogenase iron-sulfur subunit

Gene

frdB

Organism
Peptococcaceae bacterium BRH_c4a
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Catalytic activityi

Succinate + a quinone = fumarate + a quinol.UniRule annotation

Cofactori

Protein has several cofactor binding sites:
  • [2Fe-2S] clusterUniRule annotationNote: Binds 1 [2Fe-2S] cluster.UniRule annotation
  • [3Fe-4S] clusterUniRule annotationNote: Binds 1 [3Fe-4S] cluster.UniRule annotation
  • [4Fe-4S] clusterUniRule annotationNote: Binds 1 [4Fe-4S] cluster.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Ligand2Fe-2SUniRule annotation, 3Fe-4SUniRule annotation, 4Fe-4SUniRule annotation, Iron, Iron-sulfur, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Succinate dehydrogenase iron-sulfur subunitUniRule annotation (EC:1.3.5.1UniRule annotation)
Gene namesi
Name:frdBImported
ORF Names:VR68_03195Imported
OrganismiPeptococcaceae bacterium BRH_c4aImported
Taxonomic identifieri1629716 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesPeptococcaceae

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini17 – 942Fe-2S ferredoxin-typeInterPro annotationAdd BLAST78
Domaini141 – 1704Fe-4S ferredoxin-typeInterPro annotationAdd BLAST30

Sequence similaritiesi

Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.UniRule annotation

Family and domain databases

Gene3Di1.10.1060.10, 1 hit
3.10.20.30, 1 hit
InterProiView protein in InterPro
IPR036010 2Fe-2S_ferredoxin-like_sf
IPR001041 2Fe-2S_ferredoxin-type
IPR006058 2Fe2S_fd_BS
IPR017896 4Fe4S_Fe-S-bd
IPR012675 Beta-grasp_dom_sf
IPR009051 Helical_ferredxn
IPR004489 Succ_DH/fum_Rdtase_Fe-S
IPR025192 Succ_DH/fum_Rdtase_N
PfamiView protein in Pfam
PF13085 Fer2_3, 1 hit
PF13183 Fer4_8, 1 hit
SUPFAMiSSF46548 SSF46548, 1 hit
SSF54292 SSF54292, 1 hit
TIGRFAMsiTIGR00384 dhsB, 1 hit
PROSITEiView protein in PROSITE
PS00197 2FE2S_FER_1, 1 hit
PS51085 2FE2S_FER_2, 1 hit
PS51379 4FE4S_FER_2, 1 hit

Sequencei

Sequence statusi: Complete.

A0A0F2NMG1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSIQRKFSIF RYNPNTPDVK PFMQEYVIEE PQSMTIFTAL NKIREEQDPS
60 70 80 90 100
LMFDFVCRAA ICGSCAMVIN GKPRLACKTL TTDFSGTITL MPLPVFKLVG
110 120 130 140 150
DLSVDTGAWF RHLSLKTKAW VHTDKEFDPN AAEERMDNET ALLIYEAERC
160 170 180 190 200
IECGCCIAGC VTANIREDFL GAAGINRVAR FMVDPRDERS GNEYFEVIGS
210 220 230 240
DEGAFGCMGL MACDDNCPMQ LPLQLQLSFV RRKMLAFGLS K
Length:241
Mass (Da):27,063
Last modified:June 24, 2015 - v1
Checksum:i2A8DD9D0721D2ECA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
LADN01000021 Genomic DNA Translation: KJS02360.1

Genome annotation databases

PATRICifig|1629716.3.peg.2627

Similar proteinsi

Entry informationi

Entry nameiA0A0F2NMG1_9FIRM
AccessioniPrimary (citable) accession number: A0A0F2NMG1
Entry historyiIntegrated into UniProtKB/TrEMBL: June 24, 2015
Last sequence update: June 24, 2015
Last modified: April 25, 2018
This is version 12 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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