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Protein

Putative HTH-type transcriptional regulatory protein MSLAZ_0747

Gene

MSLAZ_0747

Organism
Methanosarcina lacustris Z-7289
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingUniRule annotationImported
Biological processTranscription, Transcription regulationUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Putative HTH-type transcriptional regulatory protein MSLAZ_0747UniRule annotation
Gene namesi
ORF Names:MSLAZ_0747Imported
OrganismiMethanosarcina lacustris Z-7289Imported
Taxonomic identifieri1434111 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaStenosarchaea groupMethanomicrobiaMethanosarcinalesMethanosarcinaceaeMethanosarcina
Proteomesi
  • UP000033072 Componenti: Chromosome

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini132 – 190HTH cro/C1-typeInterPro annotationAdd BLAST59

Phylogenomic databases

KOiK07728
OrthoDBiPOG093Z05RI

Family and domain databases

CDDicd00093 HTH_XRE, 1 hit
HAMAPiMF_00584 HTH_type_cro_C1, 1 hit
InterProiView protein in InterPro
IPR001387 Cro/C1-type_HTH
IPR010982 Lambda_DNA-bd_dom_sf
IPR020886 Tscrpt_reg_HTH_Cro/C1
PfamiView protein in Pfam
PF01381 HTH_3, 1 hit
SMARTiView protein in SMART
SM00530 HTH_XRE, 1 hit
SUPFAMiSSF47413 SSF47413, 1 hit
PROSITEiView protein in PROSITE
PS50943 HTH_CROC1, 1 hit

Sequencei

Sequence statusi: Complete.

A0A0E3S517-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MTKEVLIHQI IDVLSRAGFA LSDRCNIRPR SFDVAARKYE TLLLCKVLFN
60 70 80 90 100
IDGLNEETAR EMKYLAEYLG GSAIVVGAKT RDQMLEDSVV YMRYDILALN
110 120 130 140 150
VQTLHDYFVE NIPPLVSAAP GGLYVAIEGG LLRKSRTDQS MSLGTLASMV
160 170 180 190 200
GVSRRTISKY EEEGMDASID VVLQLEDIFG LELARPIDIL KSCGSRRSRK
210 220 230 240 250
KAEPEKTEPE KEETQVKHNT LLPEDLILNT ISMLGYDVLH TAQAPFKAIS
260 270 280 290 300
RDKSSVILTG VSEFNTTVIK RAHLMSSISC ITETQSVFII NGHSKLKSVE
310 320 330
NTVLIEKKEL DRISDSQELL EFIEERKENH SGA
Length:333
Mass (Da):37,211
Last modified:June 24, 2015 - v1
Checksum:iC4C3C2C0C66BBECC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP009515 Genomic DNA Translation: AKB74008.1
RefSeqiWP_048124794.1, NZ_CP009515.1

Genome annotation databases

EnsemblBacteriaiAKB74008; AKB74008; MSLAZ_0747
GeneIDi24805450
KEGGimls:MSLAZ_0747
PATRICifig|1434111.4.peg.935

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP009515 Genomic DNA Translation: AKB74008.1
RefSeqiWP_048124794.1, NZ_CP009515.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAKB74008; AKB74008; MSLAZ_0747
GeneIDi24805450
KEGGimls:MSLAZ_0747
PATRICifig|1434111.4.peg.935

Phylogenomic databases

KOiK07728
OrthoDBiPOG093Z05RI

Family and domain databases

CDDicd00093 HTH_XRE, 1 hit
HAMAPiMF_00584 HTH_type_cro_C1, 1 hit
InterProiView protein in InterPro
IPR001387 Cro/C1-type_HTH
IPR010982 Lambda_DNA-bd_dom_sf
IPR020886 Tscrpt_reg_HTH_Cro/C1
PfamiView protein in Pfam
PF01381 HTH_3, 1 hit
SMARTiView protein in SMART
SM00530 HTH_XRE, 1 hit
SUPFAMiSSF47413 SSF47413, 1 hit
PROSITEiView protein in PROSITE
PS50943 HTH_CROC1, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A0E3S517_9EURY
AccessioniPrimary (citable) accession number: A0A0E3S517
Entry historyiIntegrated into UniProtKB/TrEMBL: June 24, 2015
Last sequence update: June 24, 2015
Last modified: October 10, 2018
This is version 23 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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