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Protein
Submitted name:

Uncharacterized protein

Gene
N/A
Organism
Oryza nivara (Indian wild rice)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri26 – 53C3H1-typePROSITE-ProRule annotationAdd BLAST28
Zinc fingeri143 – 170C3H1-typePROSITE-ProRule annotationAdd BLAST28
Zinc fingeri299 – 328C3H1-typePROSITE-ProRule annotationAdd BLAST30

GO - Molecular functioni

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
OrganismiOryza nivara (Indian wild rice)Imported
Taxonomic identifieri4536 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
Proteomesi
  • UP000006591 Componenti: Chromosome 6

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei12 – 29HelicalSequence analysisAdd BLAST18

Keywords - Cellular componenti

Membrane

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini26 – 53C3H1-typeInterPro annotationAdd BLAST28
Domaini143 – 170C3H1-typeInterPro annotationAdd BLAST28
Domaini212 – 270RING-typeInterPro annotationAdd BLAST59
Domaini299 – 328C3H1-typeInterPro annotationAdd BLAST30

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri26 – 53C3H1-typePROSITE-ProRule annotationAdd BLAST28
Zinc fingeri143 – 170C3H1-typePROSITE-ProRule annotationAdd BLAST28
Zinc fingeri299 – 328C3H1-typePROSITE-ProRule annotationAdd BLAST30

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis, Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

OMAiPCRYFDE
OrthoDBiEOG09360FX2

Family and domain databases

Gene3Di3.30.40.10, 1 hit
InterProiView protein in InterPro
IPR018957 Znf_C3HC4_RING-type
IPR000571 Znf_CCCH
IPR036855 Znf_CCCH_sf
IPR001841 Znf_RING
IPR013083 Znf_RING/FYVE/PHD
IPR017907 Znf_RING_CS
PfamiView protein in Pfam
PF00097 zf-C3HC4, 1 hit
PF00642 zf-CCCH, 2 hits
SMARTiView protein in SMART
SM00184 RING, 1 hit
SM00356 ZnF_C3H1, 3 hits
SUPFAMiSSF90229 SSF90229, 1 hit
PROSITEiView protein in PROSITE
PS50103 ZF_C3H1, 3 hits
PS00518 ZF_RING_1, 1 hit
PS50089 ZF_RING_2, 1 hit

Sequencei

Sequence statusi: Complete.

A0A0E0HPT9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSTKRLNKGS AGVACVYFAF LHILVLRTLQ VCTFYQKGSC SYGSRCRYDH
60 70 80 90 100
VKVSRNPTVA PPPSSSTTTR ASSSLQPLSF GRPHHVGYQA DSSNPRQQIS
110 120 130 140 150
MDVLAHSGSK PVWRNDFQHE SVLEDGIDWS ISPTVQNQTT LSPADLPICS
160 170 180 190 200
FAAGGNCPYG EECPQMHGDL CTTCGKMCLH PYRPDEREEH TKLCEKNHKR
210 220 230 240 250
LESLKRSQEI ECSVCLDRVL SKPTAAERKF GLLSECDHPF CISCIRNWRN
260 270 280 290 300
NSPTSGMDVN SALRACPICR KLSYYVIPSV LWYFSKEEKL EIIDNYKAKL
310 320 330 340 350
KSIDCKYFDF GTGTCPFGSS CFYKHAYRDG RLEEVILRHL DADDGSTVIA
360
KNIRLSDFLS RLHL
Length:364
Mass (Da):40,974
Last modified:May 27, 2015 - v1
Checksum:i1037A8EE8F77F77D
GO

Genome annotation databases

EnsemblPlantsiONIVA06G14620.1; ONIVA06G14620.1; ONIVA06G14620
GrameneiONIVA06G14620.1; ONIVA06G14620.1; ONIVA06G14620

Similar proteinsi

Entry informationi

Entry nameiA0A0E0HPT9_ORYNI
AccessioniPrimary (citable) accession number: A0A0E0HPT9
Entry historyiIntegrated into UniProtKB/TrEMBL: May 27, 2015
Last sequence update: May 27, 2015
Last modified: May 23, 2018
This is version 25 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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