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Protein
Submitted name:

Uncharacterized protein

Gene
N/A
Organism
Oryza nivara (Indian wild rice)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
OrganismiOryza nivara (Indian wild rice)Imported
Taxonomic identifieri4536 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
Proteomesi
  • UP000006591 Componenti: Chromosome 3

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Interactioni

GO - Molecular functioni

Structurei

3D structure databases

ProteinModelPortaliA0A0E0GTX1
SMRiA0A0E0GTX1
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 61MADS-boxInterPro annotationAdd BLAST61
Domaini88 – 178K-boxInterPro annotationAdd BLAST91

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili154 – 174Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

OMAiEMQKINH
OrthoDBiEOG09360M1J

Family and domain databases

CDDicd00265 MADS_MEF2_like, 1 hit
Gene3Di3.40.1810.10, 1 hit
InterProiView protein in InterPro
IPR033896 MADS_MEF2-like
IPR002487 TF_Kbox
IPR002100 TF_MADSbox
IPR036879 TF_MADSbox_sf
PfamiView protein in Pfam
PF01486 K-box, 1 hit
PF00319 SRF-TF, 1 hit
PRINTSiPR00404 MADSDOMAIN
SMARTiView protein in SMART
SM00432 MADS, 1 hit
SUPFAMiSSF55455 SSF55455, 1 hit
PROSITEiView protein in PROSITE
PS51297 K_BOX, 1 hit
PS00350 MADS_BOX_1, 1 hit
PS50066 MADS_BOX_2, 1 hit

Sequencei

Sequence statusi: Complete.

A0A0E0GTX1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGRGKVVLQR IENKISRQVT FAKRRNGLLK KAYELSILCD AEVALVLFSH
60 70 80 90 100
AGRLYQFSSS SNMLKTLERY QRYIYASQDA AAPTSDEMQN NYQEYVNLKA
110 120 130 140 150
HVEILQQSQR NLLGEDLAPL ATNELEQLES QVVRTLKQIR SRKTQVLLDE
160 170 180 190 200
LCDLKRKEQM LQDANRVLKR KLDEIDVEAA PPQPPWNGNC SNGHGGGGGV
210 220 230
FSSEPPQPEH FFQALGLHAV DVNQPPAPPP GGYPPEWMA
Length:239
Mass (Da):26,881
Last modified:May 27, 2015 - v1
Checksum:iD8D4E0EDEE173CA3
GO

Genome annotation databases

EnsemblPlantsiONIVA03G35990.1; ONIVA03G35990.1; ONIVA03G35990
GrameneiONIVA03G35990.1; ONIVA03G35990.1; ONIVA03G35990

Similar proteinsi

Entry informationi

Entry nameiA0A0E0GTX1_ORYNI
AccessioniPrimary (citable) accession number: A0A0E0GTX1
Entry historyiIntegrated into UniProtKB/TrEMBL: May 27, 2015
Last sequence update: May 27, 2015
Last modified: June 20, 2018
This is version 25 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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