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Protein

Pectinesterase

Gene
N/A
Organism
Leersia perrieri
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Catalytic activityi

Pectin + n H2O = n methanol + pectate.UniRule annotation

Pathwayi: pectin degradation

This protein is involved in step 1 of the subpathway that synthesizes 2-dehydro-3-deoxy-D-gluconate from pectin.UniRule annotation
Proteins known to be involved in the 5 steps of the subpathway in this organism are:
  1. Pectinesterase, Pectinesterase, Pectinesterase, Pectinesterase, Pectinesterase, Pectinesterase, Pectinesterase, Pectinesterase, Pectinesterase, Pectinesterase, Pectinesterase, Pectinesterase, Pectinesterase, Pectinesterase, Pectinesterase, Pectinesterase, Pectinesterase, Pectinesterase, Pectinesterase, Pectinesterase, Pectinesterase, Pectinesterase, Pectinesterase, Pectinesterase, Pectinesterase, Pectinesterase, Pectinesterase, Pectinesterase, Pectinesterase, Pectinesterase, Pectinesterase
  2. Pectate lyase, Pectate lyase, Pectate lyase, Pectate lyase, Pectate lyase, Pectate lyase, Pectate lyase, Pectate lyase, Pectate lyase, Pectate lyase, Pectate lyase, Pectate lyase
  3. no protein annotated in this organism
  4. no protein annotated in this organism
  5. no protein annotated in this organism
This subpathway is part of the pathway pectin degradation, which is itself part of Glycan metabolism.
View all proteins of this organism that are known to be involved in the subpathway that synthesizes 2-dehydro-3-deoxy-D-gluconate from pectin, the pathway pectin degradation and in Glycan metabolism.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei263PROSITE-ProRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionAspartyl esteraseUniRule annotationSAAS annotation, Hydrolase

Enzyme and pathway databases

UniPathwayi
UPA00545;UER00823

Names & Taxonomyi

Protein namesi
Recommended name:
PectinesteraseUniRule annotation (EC:3.1.1.11UniRule annotation)
OrganismiLeersia perrieriImported
Taxonomic identifieri77586 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeLeersia
Proteomesi
  • UP000032180 Componenti: Chromosome 12

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 34UniRule annotationAdd BLAST34
ChainiPRO_500511558335 – 410PectinesteraseUniRule annotationAdd BLAST376

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini105 – 399PectinesteraseInterPro annotationAdd BLAST295

Keywords - Domaini

SignalUniRule annotation

Family and domain databases

Gene3Di2.160.20.10, 1 hit
InterProiView protein in InterPro
IPR012334 Pectin_lyas_fold
IPR011050 Pectin_lyase_fold/virulence
IPR033131 Pectinesterase_Asp_AS
IPR000070 Pectinesterase_cat
PfamiView protein in Pfam
PF01095 Pectinesterase, 1 hit
SUPFAMiSSF51126 SSF51126, 1 hit
PROSITEiView protein in PROSITE
PS00503 PECTINESTERASE_2, 1 hit

Sequencei

Sequence statusi: Complete.

A0A0D9Y0F6-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MKITSSRSNN SPVILATISV LALLISSSPR PASSQNQQAT FAINPGAAAD
60 70 80 90 100
AAGNKASPDA GDGSFGEFIT ENVQHYALSE KKYAGKEKGV DGELSAAEAG
110 120 130 140 150
AARFVVSADG KGKFKTISDA VKAVPEKNKK RVILDIRPGT YKEKVVIPYT
160 170 180 190 200
KPFITLVGNP KSPATITWDD TAATRGKDGA PVGTVGSATV AVEADYFVAS
210 220 230 240 250
GIVFKNNAPM AAPGQKGGQA VALRVFGSKV AFYNCTIAGG QDTLYDHKGL
260 270 280 290 300
HYFKNCVIQG SVDFIFGFGR SLYEDCTIVS VTKQVAVLTA QQRSKSIAEA
310 320 330 340 350
IDTGFSFLRC KITGIGQIYL GRAWGDSSRV VYSYTTMGKE VVPVGWDGWN
360 370 380 390 400
IQKPEHSGIY YGEYKCSGPG ALPSKRIGWS LVLNDVQAKP FTGTHFIYGH
410
SWILPPPKSS
Length:410
Mass (Da):43,601
Last modified:May 27, 2015 - v1
Checksum:i547FF420291CE2E2
GO

Genome annotation databases

EnsemblPlantsiLPERR12G13140.1; LPERR12G13140.1; LPERR12G13140
GrameneiLPERR12G13140.1; LPERR12G13140.1; LPERR12G13140

Similar proteinsi

Cross-referencesi

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiLPERR12G13140.1; LPERR12G13140.1; LPERR12G13140
GrameneiLPERR12G13140.1; LPERR12G13140.1; LPERR12G13140

Enzyme and pathway databases

UniPathwayi
UPA00545;UER00823

Family and domain databases

Gene3Di2.160.20.10, 1 hit
InterProiView protein in InterPro
IPR012334 Pectin_lyas_fold
IPR011050 Pectin_lyase_fold/virulence
IPR033131 Pectinesterase_Asp_AS
IPR000070 Pectinesterase_cat
PfamiView protein in Pfam
PF01095 Pectinesterase, 1 hit
SUPFAMiSSF51126 SSF51126, 1 hit
PROSITEiView protein in PROSITE
PS00503 PECTINESTERASE_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A0D9Y0F6_9ORYZ
AccessioniPrimary (citable) accession number: A0A0D9Y0F6
Entry historyiIntegrated into UniProtKB/TrEMBL: May 27, 2015
Last sequence update: May 27, 2015
Last modified: July 5, 2017
This is version 17 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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