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Protein

Alpha-amylase

Gene
N/A
Organism
Oryza barthii
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

Cofactori

Ca2+UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei204NucleophileUniRule annotation1
Active sitei229Proton donorUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidaseUniRule annotation, Hydrolase
Biological processCarbohydrate metabolismUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Alternative name(s):
1,4-alpha-D-glucan glucanohydrolaseUniRule annotation
OrganismiOryza barthiiImported
Taxonomic identifieri65489 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
Proteomesi
  • UP000026960 Componenti: Chromosome 8

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 25UniRule annotationAdd BLAST25
ChainiPRO_501060539626 – 437Alpha-amylaseUniRule annotationAdd BLAST412

Structurei

3D structure databases

ProteinModelPortaliA0A0D3H1A8
SMRiA0A0D3H1A8
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini26 – 370AamyInterPro annotationAdd BLAST345
Domaini365 – 425Alpha-amyl_C2InterPro annotationAdd BLAST61

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Keywords - Domaini

SignalUniRule annotation

Phylogenomic databases

OrthoDBiEOG093600FS

Family and domain databases

Gene3Di2.60.40.1180, 1 hit
InterProiView protein in InterPro
IPR012850 A-amylase_bs_C
IPR013775 A-amylase_pln
IPR006046 Alpha_amylase
IPR006047 Glyco_hydro_13_cat_dom
IPR013780 Glyco_hydro_b
IPR017853 Glycoside_hydrolase_SF
PfamiView protein in Pfam
PF07821 Alpha-amyl_C2, 1 hit
PF00128 Alpha-amylase, 1 hit
PIRSFiPIRSF001028 Alph-amls_plant, 1 hit
PRINTSiPR00110 ALPHAAMYLASE
SMARTiView protein in SMART
SM00642 Aamy, 1 hit
SM00810 Alpha-amyl_C2, 1 hit
SUPFAMiSSF51445 SSF51445, 1 hit

Sequencei

Sequence statusi: Complete.

A0A0D3H1A8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGKHHVTLCC VVFAVLCLAS SLAQAQVLFQ GFNWESWRKQ GGWYNFLHEK
60 70 80 90 100
VEEIASTGAT HVWLPPPSHS VSPQGYMPGR LYDLDASKYG TEAELKSLIE
110 120 130 140 150
AFHDKNVECL ADIVINHRCA DYKDSRGVYC VFEGGTPDGR LDWGPDMICS
160 170 180 190 200
DDTQYSNGRG HRDTGAGFGA APDIDHLNPR VQRELTDWLN WLRTDLGFDG
210 220 230 240 250
WRLDFAKGYS APLARIYVDN TNPTFVVGEI WSSLIYNGDG KPSTNQDADR
260 270 280 290 300
QELVNWVEGV GKPATAFDFT TKGILQAAVQ GELWRLHDGN GKAPGLMGWM
310 320 330 340 350
PDQAVTFVDN HDTGSTQSLW PFPSDKVMQG YAYILTHPGI PCIFYDHVFD
360 370 380 390 400
WNLQHEIATL AEIRSRNGIH AESTLDILKA EGDIYVAMID GKVITKLGPR
410 420 430
YDAGGIIPSD FHVVAHGNDY CVWEKEGLRV PAGRKHY
Length:437
Mass (Da):48,708
Last modified:April 29, 2015 - v1
Checksum:iC0E8276CCEA16602
GO

Genome annotation databases

EnsemblPlantsiOBART08G17880.1; OBART08G17880.1; OBART08G17880
GrameneiOBART08G17880.1; OBART08G17880.1; OBART08G17880

Similar proteinsi

Entry informationi

Entry nameiA0A0D3H1A8_9ORYZ
AccessioniPrimary (citable) accession number: A0A0D3H1A8
Entry historyiIntegrated into UniProtKB/TrEMBL: April 29, 2015
Last sequence update: April 29, 2015
Last modified: July 18, 2018
This is version 25 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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