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Protein
Submitted name:

Uncharacterized protein

Gene
N/A
Organism
Oryza barthii
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
OrganismiOryza barthiiImported
Taxonomic identifieri65489 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
Proteomesi
  • UP000026960 Componenti: Chromosome 4

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1127 – 1159LisHInterPro annotationAdd BLAST33

Phylogenomic databases

OrthoDBiEOG093600Q2

Family and domain databases

Gene3Di2.130.10.10, 1 hit
InterProiView protein in InterPro
IPR016024 ARM-type_fold
IPR006594 LisH
IPR033270 VPRBP/DCAF1
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR001680 WD40_repeat
IPR036322 WD40_repeat_dom_sf
PANTHERiPTHR13129 PTHR13129, 1 hit
SMARTiView protein in SMART
SM00667 LisH, 1 hit
SM00320 WD40, 3 hits
SUPFAMiSSF48371 SSF48371, 3 hits
SSF50978 SSF50978, 1 hit
PROSITEiView protein in PROSITE
PS50896 LISH, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

A0A0D3G231-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MNSIASKIAS LTVLFPCRYA QECANSPSYN NTNARNSHTI GKLANLLREN
60 70 80 90 100
DDFYELVFCK FLSDNSYSAA VRSAAARLLL SCYSAWTPQY PHAFEDAIVE
110 120 130 140 150
NIKKWVTEDG GASNECESKH LGKNNKPTDA DMLRTYAIGL LAMALCGGGQ
160 170 180 190 200
LVEDVLTMGV SAKLMHFLRV RVHGDVACAQ KDSNIPLDTK HPRSRDENRS
210 220 230 240 250
KSRLVQDSSR LDGMRSGDGI SIDPTSENCD NVMGMRHAHG ERWIDDAASL
260 270 280 290 300
QPERADSSLD LFDAMEAGAT NDRTYSASIC DTKSRVGERL SALRPGRDEE
310 320 330 340 350
MNENTRDDLL KRKLSRTGSR LRGKSKAGES LPESERTPLS PTSGLRIGTR
360 370 380 390 400
TSREKNMVRI EDANKAIDVN NSSPGIEPFN AISKEEYEDR FKDCIIGLKD
410 420 430 440 450
ISDIVLKAVR AAEAEARSAN APDEAVKAAG DAAAELVKSA ASEVWKTGNN
460 470 480 490 500
GDAVVLAAEK AAATVVDAAM STSVSRSNQV GEEHVVEEPV QISEDHELED
510 520 530 540 550
FVITDHGQLL QLREKYSIQC LQILGEYVEA LGPVLHEKGV DVCLALLQRS
560 570 580 590 600
IKDQGGHGHF TLLPDVLRLI CALAAHRKFA ALFVDRGGIQ KILSVPRIAQ
610 620 630 640 650
TYTALSACLF TFGSLQSTME RICALSSDTL NNVVELALQL LECPQDSARK
660 670 680 690 700
NAAIFFAAAF VFKAILDSFD AKDGMQKVLG ILHGAASVRS GGNSGALGSS
710 720 730 740 750
NVNQGNDRSP AEVLTASEKQ VAYHSCVALR QYFRAHLLQL VDSIRPSKSI
760 770 780 790 800
RSIARNTSSA RAGYKPFDIG NEAMDAVFRQ IQRDRKLGPA LVRARWPVLD
810 820 830 840 850
KFLASNGHIT MLELCQAPPT DRYLHDLTQY AFGVLHITTL VPYCRKLIVH
860 870 880 890 900
ATLSNNRVGM SVLLDAANSF GYVDPEVICP ALNVLVNLVC PPPSISNKSS
910 920 930 940 950
STGNQQPAAT QAVGGAFSEN RDRNAEKCTT DRNLTANQGE SRERCGDGNT
960 970 980 990 1000
SQQGNTVQIS TPVVPSGVVG DRRISLGVGA GGPGLAAQLE QGYRQAREVV
1010 1020 1030 1040 1050
RANNGIKILL QLLSSRMVTP PVAIDPIRAL ACRVLLGLAR DDAIAHILTK
1060 1070 1080 1090 1100
LQVGKKLSEL IRDTSGQSIG GDNSRWQNEL TQVAIELIAV LTNSGKETTL
1110 1120 1130 1140 1150
AATDAAAPAL RRIERAGIAA ATPVSYHSRE LMQLIHEHLL GSGFTATAAM
1160 1170 1180 1190 1200
LQKEADLAPL PSTAAVTPVH QVAALETSSA QQQWPSGRVQ GFVPDTTKVT
1210 1220 1230 1240 1250
TDQTGQRSDS VLPSSKKKSL SFSSSFSKRT QPSHLFSGNR ASNSLKSPVP
1260 1270 1280 1290 1300
IGNVDNMICA ASTVNTGDAE TSHKTPLSLP QKRKLVDMKD LSSASAAKRP
1310 1320 1330 1340 1350
AMVDQACQSP VFQTPAPTRR GLSVAVDSPT ASFHSGRPNF NNIYTENLDD
1360 1370 1380 1390 1400
SQGTPGATIT TPHHSASDQQ PVNLECMTLD SLVVQYLKHQ HRQCPAPITT
1410 1420 1430 1440 1450
LPPLSLLHPH VCPEPSRSLS APANIAARMG SREIRRQFSG IQIPRRDRQF
1460 1470 1480 1490 1500
IYSRFKLCRV CRDESSLLTC MTFLGDASRV AAGNHTGELR VFDCNTANIL
1510 1520 1530 1540 1550
ETQTCHQQLV TIVESASSGG NELILTSSLN EVKVWDAFSV SGGPLHTFEG
1560 1570 1580 1590 1600
CKAARFSHSG TSFAALSTDT TRREVLLYDV QTYNLDLRLP DNSGYSGGRG
1610 1620 1630 1640 1650
YVQPIIHFSP SDTMLLWNGV LWDRRSPNPV HQFDQFTDYG GGGFHPAGNE
1660 1670 1680 1690 1700
VIINSEVWDL RKFKLLRSVP SLDQTVIKFN GRGDVIYAIL RRNLDDVTSS
1710 1720 1730 1740 1750
IHTRRVRHPL FPAFRTIDAV TYSDIATVQI DRGVLDLATE PNDSLLGVVA
1760 1770 1780 1790 1800
MDDPDEMFSS ARLFEGGHGE ETAPSARAYG TIRIHSLGRL PQLQEHMELS

GFIL
Length:1,804
Mass (Da):195,897
Last modified:April 29, 2015 - v1
Checksum:i6A43E6CD737A4E19
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A0D3G230A0A0D3G230_9ORYZ
Uncharacterized protein
1,780Annotation score:

Genome annotation databases

EnsemblPlantsiOBART04G30690.2; OBART04G30690.2; OBART04G30690
GrameneiOBART04G30690.2; OBART04G30690.2; OBART04G30690

Similar proteinsi

Cross-referencesi

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiOBART04G30690.2; OBART04G30690.2; OBART04G30690
GrameneiOBART04G30690.2; OBART04G30690.2; OBART04G30690

Phylogenomic databases

OrthoDBiEOG093600Q2

Family and domain databases

Gene3Di2.130.10.10, 1 hit
InterProiView protein in InterPro
IPR016024 ARM-type_fold
IPR006594 LisH
IPR033270 VPRBP/DCAF1
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR001680 WD40_repeat
IPR036322 WD40_repeat_dom_sf
PANTHERiPTHR13129 PTHR13129, 1 hit
SMARTiView protein in SMART
SM00667 LisH, 1 hit
SM00320 WD40, 3 hits
SUPFAMiSSF48371 SSF48371, 3 hits
SSF50978 SSF50978, 1 hit
PROSITEiView protein in PROSITE
PS50896 LISH, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A0D3G231_9ORYZ
AccessioniPrimary (citable) accession number: A0A0D3G231
Entry historyiIntegrated into UniProtKB/TrEMBL: April 29, 2015
Last sequence update: April 29, 2015
Last modified: September 12, 2018
This is version 22 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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