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Protein
Submitted name:

Uncharacterized protein

Gene
N/A
Organism
Oryza barthii
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
OrganismiOryza barthiiImported
Taxonomic identifieri65489 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
Proteomesi
  • UP000026960 Componenti: Chromosome 4

Interactioni

GO - Molecular functioni

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini91 – 140BHLHInterPro annotationAdd BLAST50

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili130 – 157Sequence analysisAdd BLAST28

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

OrthoDBiEOG09360MCJ

Family and domain databases

CDDicd00083 HLH, 1 hit
Gene3Di4.10.280.10, 1 hit
InterProiView protein in InterPro
IPR011598 bHLH_dom
IPR036638 HLH_DNA-bd_sf
PfamiView protein in Pfam
PF00010 HLH, 1 hit
SMARTiView protein in SMART
SM00353 HLH, 1 hit
SUPFAMiSSF47459 SSF47459, 1 hit
PROSITEiView protein in PROSITE
PS50888 BHLH, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

A0A0D3FTX6-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEAAADMGVL LDLYWHTPHI FDLAVADSLL MDGFGGGMYG PAAAPATPAM
60 70 80 90 100
VEKEYDESLS ELYAYTSQSR YADSSSPDVV NSCSTAVASA AASSKNIAME
110 120 130 140 150
RDRRKRLNEK LFALRAVVPK ITKMDKASIV RDAIAHIEKL QEEERQLLDE
160 170 180 190 200
ISVLQSAAAV AATAVEDVDD SGVTMPSMKK LRSTPPLDGG GGALRVASSP
210 220 230 240 250
PLQILEVETK ETEDFYGLIL QTSQSWPSDP QLQVSKVGEK TVAVSIRCAK
260 270 280 290 300
TRGAMAKVCH AVESLRLKVV SASVAAVDGT IVHTMFVETE QMSGAQEMKQ
310
RIQSSLLSAP
Length:310
Mass (Da):33,237
Last modified:April 29, 2015 - v1
Checksum:i3C533AED46308E01
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A0D3FTX5A0A0D3FTX5_9ORYZ
Uncharacterized protein
283Annotation score:

Genome annotation databases

EnsemblPlantsiOBART04G06800.2; OBART04G06800.2; OBART04G06800
GrameneiOBART04G06800.2; OBART04G06800.2; OBART04G06800

Similar proteinsi

Cross-referencesi

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiOBART04G06800.2; OBART04G06800.2; OBART04G06800
GrameneiOBART04G06800.2; OBART04G06800.2; OBART04G06800

Phylogenomic databases

OrthoDBiEOG09360MCJ

Family and domain databases

CDDicd00083 HLH, 1 hit
Gene3Di4.10.280.10, 1 hit
InterProiView protein in InterPro
IPR011598 bHLH_dom
IPR036638 HLH_DNA-bd_sf
PfamiView protein in Pfam
PF00010 HLH, 1 hit
SMARTiView protein in SMART
SM00353 HLH, 1 hit
SUPFAMiSSF47459 SSF47459, 1 hit
PROSITEiView protein in PROSITE
PS50888 BHLH, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A0D3FTX6_9ORYZ
AccessioniPrimary (citable) accession number: A0A0D3FTX6
Entry historyiIntegrated into UniProtKB/TrEMBL: April 29, 2015
Last sequence update: April 29, 2015
Last modified: October 25, 2017
This is version 12 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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