Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

UniProtKB - A0A0D3F1N3 (A0A0D3F1N3_9ORYZ)

Entry version 16 (18 Sep 2019)
Sequence version 1 (29 Apr 2015)
Previous versions | rss
Help videoAdd a publicationFeedback
Protein
Submitted name:

Uncharacterized protein

Gene
N/A
Organism
Oryza barthii
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Protein inferred from homologyi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

Complete GO annotation on QuickGO ...

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Uncharacterized proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiOryza barthiiImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri65489 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliopsida › Liliopsida › Poales › Poaceae › BOP clade › Oryzoideae › Oryzeae › Oryzinae › Oryza
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000026960 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 2

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular_location_section">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei12 – 34HelicalSequence analysisAdd BLAST23
Transmembranei99 – 118HelicalSequence analysisAdd BLAST20
Transmembranei138 – 165HelicalSequence analysisAdd BLAST28
Transmembranei186 – 213HelicalSequence analysisAdd BLAST28
Transmembranei328 – 349HelicalSequence analysisAdd BLAST22
Transmembranei369 – 386HelicalSequence analysisAdd BLAST18
Transmembranei406 – 430HelicalSequence analysisAdd BLAST25
Transmembranei451 – 475HelicalSequence analysisAdd BLAST25
Transmembranei481 – 503HelicalSequence analysisAdd BLAST23
Transmembranei547 – 569HelicalSequence analysisAdd BLAST23
Transmembranei575 – 593HelicalSequence analysisAdd BLAST19
Transmembranei652 – 685HelicalSequence analysisAdd BLAST34
Transmembranei743 – 761HelicalSequence analysisAdd BLAST19
Transmembranei773 – 791HelicalSequence analysisAdd BLAST19
Transmembranei797 – 815HelicalSequence analysisAdd BLAST19
Transmembranei827 – 846HelicalSequence analysisAdd BLAST20
Transmembranei852 – 871HelicalSequence analysisAdd BLAST20

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Membrane

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...STRINGi		65489.OBART02G06360.1

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Family and domain databases

HAMAP database of protein families

More...HAMAPi		MF_01129 PPase_energized_pump, 1 hit

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR004131 PPase-energised_H-pump

The PANTHER Classification System

More...PANTHERi		PTHR31998 PTHR31998, 1 hit

Pfam protein domain database

More...Pfami		View protein in Pfam
PF03030 H_PPase, 1 hit

PIRSF; a whole-protein classification database

More...PIRSFi		PIRSF001265 H+-PPase, 2 hits

TIGRFAMs; a protein family database

More...TIGRFAMsi		TIGR01104 V_PPase, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A0A0D3F1N3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAAAAILPEL AAQVVIPVAA AVGIAFAVLQ WALVSKVKLT AEPRRGEAGG 
        60         70         80         90        100
AAGGKSGPSD YLIEEEEGLN DHNVVSKCAE IQTAISEGAT SFLFTEYKYV 
       110        120        130        140        150
GLFMSIFAVL IFLFLGSVEG FSTKSQPCHY SKDKTCKPAL ANAIFSTIAF 
       160        170        180        190        200
VLGAVTSLVS GFLGMKIATY ANARTTLEAR KGVGKAFITA FRSGAVMGFL 
       210        220        230        240        250
LAASGLLVLY IAINLFGIYY GDDWEGLFEA ITGYGLGGSS MALFGRVGGG 
       260        270        280        290        300
IYTKAADVGA DLVGKVERNI PEDDPRNPAV IADNVGDNVG DIAGMGSDLF 
       310        320        330        340        350
GSYAESSCAA LVVASISSFG INHEFTPMVY PLLVSSVGII ACLITTLFAT 
       360        370        380        390        400
DFFEIKAVSE IEPALKKQLI ISTAVMTVGI ALVSWLGLPY TFTIFNFGAQ 
       410        420        430        440        450
KTVQSWQLFL CVAVGLWAGL IIGFVTEYYT SNAYSPVQDV ADSCRTGAAT 
       460        470        480        490        500
NVIFGLALGY KSVIIPIFAI AFSIFLSFSL AAMYGVAVAA LGMLSTIATG 
       510        520        530        540        550
LAIDAYGPIS DNAGGIAEMA GMSHRIRERT DALDAAGNTT AAIGKGFAIG 
       560        570        580        590        600
SAALVSLALF GAFVSRAAIS TVDVLTPKVF IGLIVGAMLP YWFSAMTMKS 
       610        620        630        640        650
VGSAALKMVE EVRRQFNTIP GLMEGTTKPD YATCVKISTD ASIKEMIPPG 
       660        670        680        690        700
ALVMLTPLIV GILFGVETLS GVLAGALVSG VQIAISASNT GGAWDNAKKY 
       710        720        730        740        750
IEAGASEHAR TLGPKGSDPH KAAVIGDTIG DPLKDTSGPS LNILIKLMAV 
       760        770        780        790        800
ESLVFAPFFA THGGILFKWL RDVIVVILFL FFLLILIVIL ALALTLIIVP 
       810        820        830        840        850
VLILVIVIFS TIVVITPSFT IGFRVPVLVL IIPFLFRGIF ITSIIVALIF 
       860        870        880        890 
SILVVSLLIV IIIRLTIILV LRNRFSFAFA ENPLGEGSKT NLSFEMRY
Length:898
Mass (Da):94,507
Last modified:April 29, 2015 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iBFC08B7D822C67C1
GO

Genome annotation databases

Ensembl plant genome annotation project

More...EnsemblPlantsi		OBART02G06360.1; OBART02G06360.1; OBART02G06360

Gramene; a comparative resource for plants

More...Gramenei		OBART02G06360.1; OBART02G06360.1; OBART02G06360

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

3D structure databases

Database of comparative protein structure models

More...ModBasei		Search...

SWISS-MODEL Interactive Workspace

More...SWISS-MODEL-Workspacei		Submit a new modelling project...

Protein-protein interaction databases

STRINGi65489.OBART02G06360.1

Genome annotation databases

EnsemblPlantsiOBART02G06360.1; OBART02G06360.1; OBART02G06360
GrameneiOBART02G06360.1; OBART02G06360.1; OBART02G06360

Family and domain databases

HAMAPiMF_01129 PPase_energized_pump, 1 hit
InterProiView protein in InterPro
IPR004131 PPase-energised_H-pump
PANTHERiPTHR31998 PTHR31998, 1 hit
PfamiView protein in Pfam
PF03030 H_PPase, 1 hit
PIRSFiPIRSF001265 H+-PPase, 2 hits
TIGRFAMsiTIGR01104 V_PPase, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A0D3F1N3_9ORYZ
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A0D3F1N3
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: April 29, 2015
Last sequence update: April 29, 2015
Last modified: September 18, 2019
This is version 16 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again