UniProtKB - A0A0D3D7T2 (A0A0D3D7T2_BRAOL)
Protein
Sm domain-containing protein
Gene
N/A
Organism
Brassica oleracea var. oleracea
Status
Functioni
GO - Biological processi
- spliceosomal snRNP assembly Source: InterPro
Keywordsi
Molecular function | RibonucleoproteinSAAS annotation |
Names & Taxonomyi
Protein namesi | Recommended name: Sm domain-containing proteinInterPro annotation |
Organismi | Brassica oleracea var. oleraceaImported |
Taxonomic identifieri | 109376 [NCBI] |
Taxonomic lineagei | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliopsida › eudicotyledons › Gunneridae › Pentapetalae › rosids › malvids › Brassicales › Brassicaceae › Brassiceae › Brassica › |
Proteomesi |
|
Subcellular locationi
Nucleus
- spliceosomal complex Source: InterPro
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 27 – 92 | SmInterPro annotationAdd BLAST | 66 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 201 – 223 | DisorderedSequence analysisAdd BLAST | 23 |
Phylogenomic databases
OMAi | FTAMDAK |
Family and domain databases
CDDi | cd01721 Sm_D3, 1 hit |
InterProi | View protein in InterPro IPR027141 LSm4/Sm_D1/D3 IPR001163 LSM_dom_euk/arc IPR010920 LSM_dom_sf IPR034099 SmD3 |
PANTHERi | PTHR23338 PTHR23338, 1 hit |
Pfami | View protein in Pfam PF01423 LSM, 1 hit |
SMARTi | View protein in SMART SM00651 Sm, 1 hit |
SUPFAMi | SSF50182 SSF50182, 1 hit |
i Sequence
Sequence statusi: Complete.
A0A0D3D7T2-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MLEDEVDDEG DIEALVVGFN RDEPKSGDTG EASGHVVTVE LKSGELYRGS
60 70 80 90 100
MIECEDNWNC QLEDITFTAM DAKVSQLEHI FIRGSKVRFM VIPDILKHAP
110 120 130 140 150
MFKRLDARIK GKGGSLGVGR DRAAMRAGML SYTVQLDIEI KIKGGPIRFR
160 170 180 190 200
KAIGHLGILH LSLGISNIYN ICCSMDSQTV QRMAALEAEN ELMDLEYNED
210 220
EDTAAPATGR GTRVRGAVPP VTR
Genome annotation databases
EnsemblPlantsi | Bo7g061500.1; Bo7g061500.1; Bo7g061500 |
Gramenei | Bo7g061500.1; Bo7g061500.1; Bo7g061500 |
Cross-referencesi
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
STRINGi | 3712.Bo7g061500.1 |
Genome annotation databases
EnsemblPlantsi | Bo7g061500.1; Bo7g061500.1; Bo7g061500 |
Gramenei | Bo7g061500.1; Bo7g061500.1; Bo7g061500 |
Phylogenomic databases
OMAi | FTAMDAK |
Family and domain databases
CDDi | cd01721 Sm_D3, 1 hit |
InterProi | View protein in InterPro IPR027141 LSm4/Sm_D1/D3 IPR001163 LSM_dom_euk/arc IPR010920 LSM_dom_sf IPR034099 SmD3 |
PANTHERi | PTHR23338 PTHR23338, 1 hit |
Pfami | View protein in Pfam PF01423 LSM, 1 hit |
SMARTi | View protein in SMART SM00651 Sm, 1 hit |
SUPFAMi | SSF50182 SSF50182, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | A0A0D3D7T2_BRAOL | |
Accessioni | A0A0D3D7T2Primary (citable) accession number: A0A0D3D7T2 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | April 29, 2015 |
Last sequence update: | April 29, 2015 | |
Last modified: | July 31, 2019 | |
This is version 15 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |