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Entry version 28 (11 Dec 2019)
Sequence version 1 (29 Apr 2015)
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Protein

Myb-like domain-containing protein

Gene
N/A
Organism
Brassica oleracea var. oleracea
Status
Unreviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein inferred from homologyi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Myb-like domain-containing proteinInterPro annotation
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiBrassica oleracea var. oleraceaImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri109376 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliopsidaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeBrassiceaeBrassica
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000032141 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome C3

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
3712.Bo3g103450.1

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini805 – 869Myb-likeInterPro annotationAdd BLAST65

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni58 – 94DisorderedSequence analysisAdd BLAST37
Regioni696 – 812DisorderedSequence analysisAdd BLAST117

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi58 – 77PolarSequence analysisAdd BLAST20
Compositional biasi78 – 94PolyampholyteSequence analysisAdd BLAST17
Compositional biasi697 – 713PolyampholyteSequence analysisAdd BLAST17
Compositional biasi724 – 739PolarSequence analysisAdd BLAST16
Compositional biasi773 – 812PolyampholyteSequence analysisAdd BLAST40

Phylogenomic databases

Identification of Orthologs from Complete Genome Data

More...
OMAi
HITEWAV

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
3.30.1200.10, 1 hit
3.40.50.10710, 1 hit
3.60.15.10, 1 hit

HAMAP database of protein families

More...
HAMAPi
MF_00634 UPF0235, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR003746 DUF167
IPR001279 Metallo-B-lactamas
IPR017877 Myb-like_dom
IPR036866 RibonucZ/Hydroxyglut_hydro
IPR011108 RMMBL
IPR042173 RNase_J_2
IPR036591 YggU-like_sf

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF02594 DUF167, 1 hit
PF12706 Lactamase_B_2, 1 hit
PF07521 RMMBL, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM01152 DUF167, 1 hit
SM00849 Lactamase_B, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF56281 SSF56281, 1 hit
SSF69786 SSF69786, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50090 MYB_LIKE, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A0A0D3BFF6-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MKPAASLHGS FSYPSSSIYF DARRPVTTPS KMAAFSALSL SPYTFTFRQS
60 70 80 90 100
SRVRSTISCS VTSPPASSGT SSSSKAPRRR SGRLEGAGKS MEDSVKRKME
110 120 130 140 150
QFYEGTDGPP LRVLPIGGLG EIGMNCMLVG NYDRYILIDA GIMFPDYDDP
160 170 180 190 200
GVQKIMPDTG FIRRWKHKIE AVVITHGHED HIGALPWVIP ALDSNTPIFA
210 220 230 240 250
SSFTMELIKK RLKEHGIFVQ SRLKTFNTRR RFMAGPFEIE PITVTHSIPD
260 270 280 290 300
CSGLVLRCAD GNILHTGDWK IDEAPLDGKV FDREALEELS KEGVTLMMSD
310 320 330 340 350
STNVLSPGRT TSEKVVADAL VRNVMAAKGR VITTQFASNI HRLGSIKAAA
360 370 380 390 400
DLTGRKLVFV GMSLRTYLEA AWKDGKAPID PSSLVKVEDI EAYSPKDLLI
410 420 430 440 450
VTTGSQAEPR AALNLASYGS SHAFKLTKED IILYSAKVIP GNESRVMKMM
460 470 480 490 500
NRLADIGPKI VMGKNEMLHT SGHAYRGELE EVLKIVKPQH FLPIHGELLF
510 520 530 540 550
LKEHELLGKS TGIRHTTVIK NGEMLGVSHL RNRRVLSNGF SSLGRENLQL
560 570 580 590 600
MYSDGDKAFG TASELCIDER LRISSDGIIV LSMEIMRPGA SENALKGKIR
610 620 630 640 650
ITTRCMWLDK GRLLDALHKA AHAALSSCPV NCPLSHMERT VSEVLRKIVR
660 670 680 690 700
KYSGKRPEVI AIAMENPMAV RADEVNARMS GDPNLGSGVA ALRKVVEGNN
710 720 730 740 750
KRNRTKKTQS QEDEIIDSSA GLLAEEGTAS STYTEGAEDV PVRSSSEESD
760 770 780 790 800
DFWKSFINPP SPPSPGVTEN VDKLTDAEAK TEDSENSREE KEDDDTSDSQ
810 820 830 840 850
TKSSTKRVRR NKWKPEEVKK VIRMRGELHS RFQVVKGRMA LWEEISSNLS
860 870 880 890 900
AEGINRSPGQ CKSLWASLIQ KYEECKADER SKTSWSHYED MNNILSELDT
910 920 930 940 950
PAPKERLQSE ERGEYRFDEE RCRRERRIRT RARTRRRKDP TPISSCTTAS
960 970 980 990 1000
TVVLMSLSLK MPKRKTDRSS VLDKKKHLAR LNVSEGGKVL LKRGEVKLER
1010 1020 1030 1040 1050
QFRMNCIGCE LFVCYRAEES LETAAFVYIV DGALSAVAAE TNPQDAPVPP
1060 1070 1080 1090 1100
CISQLDGGLV QVAIEVEDRA QRSAITRVNA DDVRVTIAAP AARGEANNEL
1110 1120 1130 1140
LEFMGRVLGL RLSQMTLQRG WNSKSKLLVV EDLSARQVYE KLLEAVVS
Length:1,148
Mass (Da):127,365
Last modified:April 29, 2015 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i846D1392035858DB
GO

Genome annotation databases

Ensembl plant genome annotation project

More...
EnsemblPlantsi
Bo3g103450.1; Bo3g103450.1; Bo3g103450

Gramene; a comparative resource for plants

More...
Gramenei
Bo3g103450.1; Bo3g103450.1; Bo3g103450

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

STRINGi3712.Bo3g103450.1

Genome annotation databases

EnsemblPlantsiBo3g103450.1; Bo3g103450.1; Bo3g103450
GrameneiBo3g103450.1; Bo3g103450.1; Bo3g103450

Phylogenomic databases

OMAiHITEWAV

Family and domain databases

Gene3Di3.30.1200.10, 1 hit
3.40.50.10710, 1 hit
3.60.15.10, 1 hit
HAMAPiMF_00634 UPF0235, 1 hit
InterProiView protein in InterPro
IPR003746 DUF167
IPR001279 Metallo-B-lactamas
IPR017877 Myb-like_dom
IPR036866 RibonucZ/Hydroxyglut_hydro
IPR011108 RMMBL
IPR042173 RNase_J_2
IPR036591 YggU-like_sf
PfamiView protein in Pfam
PF02594 DUF167, 1 hit
PF12706 Lactamase_B_2, 1 hit
PF07521 RMMBL, 1 hit
SMARTiView protein in SMART
SM01152 DUF167, 1 hit
SM00849 Lactamase_B, 1 hit
SUPFAMiSSF56281 SSF56281, 1 hit
SSF69786 SSF69786, 1 hit
PROSITEiView protein in PROSITE
PS50090 MYB_LIKE, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A0D3BFF6_BRAOL
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A0D3BFF6
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: April 29, 2015
Last sequence update: April 29, 2015
Last modified: December 11, 2019
This is version 28 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Technical termi

Reference proteomeImported
UniProt is an ELIXIR core data resource
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