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Protein
Submitted name:

Uncharacterized protein

Gene

B456_005G231800

Organism
Gossypium raimondii (New World cotton)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:B456_005G231800Imported
OrganismiGossypium raimondii (New World cotton)Imported
Taxonomic identifieri29730 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsMalvalesMalvaceaeMalvoideaeGossypium
Proteomesi
  • UP000032304 Componenti: Chromosome 5

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei572 – 593HelicalSequence analysisAdd BLAST22

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 26Sequence analysisAdd BLAST26
ChainiPRO_500224805427 – 630Sequence analysisAdd BLAST604

Keywords - PTMi

Disulfide bondSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini519 – 561EGF_CAInterPro annotationAdd BLAST43

Keywords - Domaini

EGF-like domainSAAS annotation, RepeatSAAS annotation, SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Family and domain databases

InterProiView protein in InterPro
IPR026823 cEGF
IPR001881 EGF-like_Ca-bd_dom
IPR013032 EGF-like_CS
IPR018097 EGF_Ca-bd_CS
IPR003137 PA_domain
PfamiView protein in Pfam
PF12662 cEGF, 1 hit
PF02225 PA, 1 hit
SMARTiView protein in SMART
SM00179 EGF_CA, 1 hit
PROSITEiView protein in PROSITE
PS01186 EGF_2, 1 hit
PS01187 EGF_CA, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All

A0A0D2NHD0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEIRRLHLLL LLQGFMLLSV MGNCYARFVV EKNSLRLTSP EKIKGTYDSA
60 70 80 90 100
IGNFGIPQYG GSMAGAVVYP KENQKGCKSF DDFGISFKSK PGALPAFVLV
110 120 130 140 150
DRGDCFFALK VWNVQQAGAS AVLVADDIQE ALITMDTPEE DRLAAKYIEN
160 170 180 190 200
ITIPSALIEK KFGETLKKAI SGGDMVNVNL DWRESVPHPD DRVEYELWTN
210 220 230 240 250
SNDECGVKCD MLMEFLKDFK GAAQILEKGG YTQFTPHYIT WYCPQAFSLS
260 270 280 290 300
RQCKSQCINY GRYCAPDPEQ DFSSGYEGKD VVIENLRQLC VFKVANETNK
310 320 330 340 350
PWLWWDYVTD FQIRCPMKEK KYNKECADVV IRALGLDGKK IEKCMGDPNA
360 370 380 390 400
DEDNPVLKEE QEAQVGKGSR GDVTILPTLV VNDRQYRGKL AKGAVLKAIC
410 420 430 440 450
AGFEETTEPA VCLSGDVETN ECLDNNGGCW QDKATNLTAC KDTFRGRVCE
460 470 480 490 500
CPLVDGVQFK GDGYSHCEAS GSGRCKINNG GCWHDARDGH AYSACLDDGN
510 520 530 540 550
GKCQCPPGFK GDGVKNCEDI DECKEKKACQ CPECSCKNTW GSYECTCSGD
560 570 580 590 600
LLYIRDHDTC ISKSGTEVRS SWAAVWVILI GLAMASGGAY LIYKYRLRSY
610 620 630
MDSEIRAIMA QYMPLDSQAE VPNHVSDSRA
Length:630
Mass (Da):69,911
Last modified:April 29, 2015 - v1
Checksum:i274DD599EFF0B5DB
GO

Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A0D2RK68A0A0D2RK68_GOSRA
Uncharacterized protein
B456_005G231800
600Annotation score:
A0A0D2PY56A0A0D2PY56_GOSRA
Uncharacterized protein
B456_005G231800
559Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM001744 Genomic DNA Translation: KJB32252.1
RefSeqiXP_012480142.1, XM_012624688.1

Genome annotation databases

EnsemblPlantsiKJB32252; KJB32252; B456_005G231800
GeneIDi105795178
GrameneiKJB32252; KJB32252; B456_005G231800
KEGGigra:105795178

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM001744 Genomic DNA Translation: KJB32252.1
RefSeqiXP_012480142.1, XM_012624688.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiKJB32252; KJB32252; B456_005G231800
GeneIDi105795178
GrameneiKJB32252; KJB32252; B456_005G231800
KEGGigra:105795178

Family and domain databases

InterProiView protein in InterPro
IPR026823 cEGF
IPR001881 EGF-like_Ca-bd_dom
IPR013032 EGF-like_CS
IPR018097 EGF_Ca-bd_CS
IPR003137 PA_domain
PfamiView protein in Pfam
PF12662 cEGF, 1 hit
PF02225 PA, 1 hit
SMARTiView protein in SMART
SM00179 EGF_CA, 1 hit
PROSITEiView protein in PROSITE
PS01186 EGF_2, 1 hit
PS01187 EGF_CA, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A0D2NHD0_GOSRA
AccessioniPrimary (citable) accession number: A0A0D2NHD0
Entry historyiIntegrated into UniProtKB/TrEMBL: April 29, 2015
Last sequence update: April 29, 2015
Last modified: February 28, 2018
This is version 17 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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