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Protein

Putative thymidine phosphorylase

Gene

QX25_12585

Organism
Pseudomonas stutzeri (Pseudomonas perfectomarina)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Catalytic activityi

Thymidine + phosphate = thymine + 2-deoxy-alpha-D-ribose 1-phosphate.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosyltransferaseUniRule annotationImported, Transferase

Names & Taxonomyi

Protein namesi
Recommended name:
Putative thymidine phosphorylaseUniRule annotation (EC:2.4.2.4UniRule annotation)
Alternative name(s):
TdRPaseUniRule annotation
Gene namesi
ORF Names:QX25_12585Imported
OrganismiPseudomonas stutzeri (Pseudomonas perfectomarina)Imported
Taxonomic identifieri316 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000031964 Componenti: Unassembled WGS sequence

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini445 – 512PYNP_CInterPro annotationAdd BLAST68

Sequence similaritiesi

Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. Type 2 subfamily.UniRule annotation

Family and domain databases

Gene3Di3.40.1030.10, 2 hits
3.90.1170.30, 1 hit
HAMAPiMF_00703 Thymid_phosp_2, 1 hit
InterProiView protein in InterPro
IPR000312 Glycosyl_Trfase_fam3
IPR036320 Glycosyl_Trfase_fam3_N_dom)sf
IPR035902 Nuc_phospho_transferase
IPR036566 PYNP-like_C_sf
IPR013102 PYNP_C
IPR017872 Pyrmidine_PPase_CS
IPR028579 Thym_Pase_Put
IPR013466 Thymidine/AMP_Pase
IPR000053 Thymidine/pyrmidine_PPase
PANTHERiPTHR10515 PTHR10515, 1 hit
PfamiView protein in Pfam
PF00591 Glycos_transf_3, 1 hit
PF07831 PYNP_C, 1 hit
PIRSFiPIRSF000478 TP_PyNP, 1 hit
SMARTiView protein in SMART
SM00941 PYNP_C, 1 hit
SUPFAMiSSF47648 SSF47648, 1 hit
SSF52418 SSF52418, 1 hit
SSF54680 SSF54680, 1 hit
TIGRFAMsiTIGR02645 ARCH_P_rylase, 1 hit
PROSITEiView protein in PROSITE
PS00647 THYMID_PHOSPHORYLASE, 1 hit

Sequencei

Sequence statusi: Complete.

A0A0C2RSF0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTSLSNQTPS ASLQPVHLAL RRVAIDTYRE NVAYLHRDCA ACRAEGFQAL
60 70 80 90 100
AKVEVRVNGK RILASLNLVD DPAIVGCDEL GLSEDAFAQL GAEAGMPASI
110 120 130 140 150
AQAEPALSIP ALHRKIAGER LRREDFLAIV RDVAEHRYSK IELTAFVVAC
160 170 180 190 200
NQGELDREEV YFLTDAMIRV GRQLDWREHP VVDKHCIGGI PGNRTSMLVV
210 220 230 240 250
PIVAAHGMLC PKTSSRAITS PAGTADTMEV LANVELPFER LCEMVREERG
260 270 280 290 300
CLAWGGTSDL SPADDVLIAV ERPLSIDSPG QMVASILSKK VAAGSTHLLL
310 320 330 340 350
DIPIGPTAKV RSMAEAQRLR KLFEFVAARL GLTLDVVITD GRQPIGNGIG
360 370 380 390 400
PVLEARDVMR VLQNDPRAPN DLRQKALRLA GRMLEFDPDV RGGDGYAIAR
410 420 430 440 450
DILESGRALK KMQSIIAAQG ARPFDHNQPA LARLSFDVLA ERDGVVTGID
460 470 480 490 500
NLQLARIANL AGAPKVQGAG VDLLRKLGEP VHTGDCLYRV YADFPADLAF
510 520
ARQATERANG VSLGRADQVP AVFVEF
Length:526
Mass (Da):56,881
Last modified:April 1, 2015 - v1
Checksum:iDA1B08210BEC96A1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
JUDR01000006 Genomic DNA Translation: KIL03802.1
RefSeqiWP_041107777.1, NZ_JUDR01000006.1

Genome annotation databases

EnsemblBacteriaiKIL03802; KIL03802; QX25_12585
PATRICifig|316.98.peg.365

Similar proteinsi

Entry informationi

Entry nameiA0A0C2RSF0_PSEST
AccessioniPrimary (citable) accession number: A0A0C2RSF0
Entry historyiIntegrated into UniProtKB/TrEMBL: April 1, 2015
Last sequence update: April 1, 2015
Last modified: March 28, 2018
This is version 15 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

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