Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Entry version 49 (12 Aug 2020)
Sequence version 1 (01 Apr 2015)
Previous versions | rss
Help videoAdd a publicationFeedback
Protein

Ribosome maturation factor RimP

Gene

rimP

Organism
Streptococcus pneumoniae
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein inferred from homologyi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Required for maturation of 30S ribosomal subunits.UniRule annotation

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Biological processRibosome biogenesisUniRule annotationARBA annotation

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Ribosome maturation factor RimPUniRule annotation
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:rimPUniRule annotationImported
ORF Names:ERS013923_01910Imported, ERS019420_01918Imported, ERS020671_01847Imported, ERS020862_02063Imported, ERS021431_02210Imported, ERS021752_02314Imported, ERS022516_01182Imported, ERS022641_01650Imported, ERS232442_02192Imported, ERS232469_01710Imported, ERS232512_01820Imported, ERS409277_01855Imported, ERS409331_00242Imported, FIU69_09470Imported, GM537_08705Imported, GM541_09825Imported, SAMEA104035342_00025Imported, SAMEA104035370_00409Imported, SAMEA104035600_00408Imported, SAMEA104035805_01149Imported, SAMEA104035833_01649Imported, SAMEA104035911_00893Imported, SAMEA104035937_00658Imported, SAMEA104035941_01011Imported, SAMEA104154666_00206Imported, SAMEA2050264_02159Imported, SAMEA2066126_02071Imported, SAMEA2335968_00213Imported, SAMEA2521861_01327Imported, SAMEA2627268_00296Imported, SAMEA3171064_01078Imported, SAMEA3389186_00841Imported, SAMEA3431359_01292Imported, SAMEA3431589_02071Imported, SAMEA3447943_00144Imported, SAMEA3713874_00171Imported, SAMEA3714216_00085Imported, SAMEA3714261_01611Imported, SAMEA3714263_00170Imported, SAMEA4388190_00183Imported, SAMEA4707892_02049Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiStreptococcus pneumoniaeImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri1313 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000347531 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Unassembled WGS sequence
  • UP000313195 Componenti: Unassembled WGS sequence
  • UP000311364 Componenti: Unassembled WGS sequence
  • UP000314107 Componenti: Unassembled WGS sequence
  • UP000490982 Componenti: Unassembled WGS sequence
  • UP000385477 Componenti: Unassembled WGS sequence
  • UP000397331 Componenti: Unassembled WGS sequence
  • UP000047077 Componenti: Unassembled WGS sequence
  • UP000069367 Componenti: Unassembled WGS sequence
  • UP000043147 Componenti: Unassembled WGS sequence
  • UP000044715 Componenti: Unassembled WGS sequence
  • UP000042694 Componenti: Unassembled WGS sequence
  • UP000338361 Componenti: Unassembled WGS sequence
  • UP000406463 Componenti: Unassembled WGS sequence
  • UP000303999 Componenti: Unassembled WGS sequence
  • UP000039618 Componenti: Unassembled WGS sequence
  • UP000313214 Componenti: Unassembled WGS sequence
  • UP000364527 Componenti: Unassembled WGS sequence
  • UP000039092 Componenti: Unassembled WGS sequence
  • UP000069624 Componenti: Unassembled WGS sequence
  • UP000329263 Componenti: Unassembled WGS sequence
  • UP000075030 Componenti: Unassembled WGS sequence
  • UP000377333 Componenti: Unassembled WGS sequence
  • UP000046907 Componenti: Unassembled WGS sequence
  • UP000407764 Componenti: Unassembled WGS sequence
  • UP000043523 Componenti: Unassembled WGS sequence
  • UP000038050 Componenti: Unassembled WGS sequence
  • UP000304894 Componenti: Unassembled WGS sequence
  • UP000372118 Componenti: Unassembled WGS sequence
  • UP000434394 Componenti: Unassembled WGS sequence
  • UP000375330 Componenti: Unassembled WGS sequence
  • UP000410422 Componenti: Unassembled WGS sequence
  • UP000043807 Componenti: Unassembled WGS sequence
  • UP000393122 Componenti: Unassembled WGS sequence
  • UP000380187 Componenti: Unassembled WGS sequence
  • UP000040630 Componenti: Unassembled WGS sequence
  • UP000305014 Componenti: Unassembled WGS sequence
  • UP000311381 Componenti: Unassembled WGS sequence
  • UP000330198 Componenti: Unassembled WGS sequence
  • UP000314803 Componenti: Unassembled WGS sequence
  • UP000360883 Componenti: Unassembled WGS sequence

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

CytoplasmUniRule annotationARBA annotation

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini15 – 87DUF150InterPro annotationAdd BLAST73
Domaini98 – 158DUF150_CInterPro annotationAdd BLAST61

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the RimP family.UniRule annotation

Family and domain databases

Conserved Domains Database

More...
CDDi
cd01734, YlxS_C, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
3.30.300.70, 1 hit

HAMAP database of protein families

More...
HAMAPi
MF_01077, RimP, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR003728, Ribosome_maturation_RimP
IPR028998, RimP_C
IPR036847, RimP_C_sf
IPR028989, RimP_N
IPR035956, RimP_N_sf

The PANTHER Classification System

More...
PANTHERi
PTHR33867, PTHR33867, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF02576, DUF150, 1 hit
PF17384, DUF150_C, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF74942, SSF74942, 1 hit
SSF75420, SSF75420, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A0A0B7LVV9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MDAIATIVEL VREVVEPVIE APFELVDIEY GKIGSDMILS IFVDKPEGIT
60 70 80 90 100
LNDTADLTEI ISPVLDTIKP DPFPEQYFLE ITSPGLERPL KTKDAVAGAV
110 120 130 140 150
GKYIHVGLYQ AIDKQKVFEG TLLAFEEDEL TMEYMDKTRK KTVRIPYSLV

SKARLAVKL
Length:159
Mass (Da):17,774
Last modified:April 1, 2015 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i78601071B2C420DB
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
CKOB01000030 Genomic DNA Translation: CIX01428.1
CGYF01000055 Genomic DNA Translation: CJB53646.1
CMJA01000017 Genomic DNA Translation: CKA59855.1
CMJU01000047 Genomic DNA Translation: CKB29730.1
CMMK01000023 Genomic DNA Translation: CKC85240.1
CMNT01000053 Genomic DNA Translation: CKD77320.1
CMOX01000026 Genomic DNA Translation: CKE34008.1
CMQE01000024 Genomic DNA Translation: CKF05991.1
CPKH01000036 Genomic DNA Translation: CMU45090.1
CGWM01000029 Genomic DNA Translation: CNZ49631.1
CROO01000033 Genomic DNA Translation: CON10056.1
FDMS01000014 Genomic DNA Translation: CVX51820.1
FDOR01000001 Genomic DNA Translation: CVX89495.1
WNHS01000036 Genomic DNA Translation: MTW24913.1
WNHY01000050 Genomic DNA Translation: MTW37389.1
VFBJ01000037 Genomic DNA Translation: TNW46316.1
FHJQ02000001 Genomic DNA Translation: VJM80405.1
CAAMCP010000027 Genomic DNA Translation: VJN04320.1
CAAMXR010000021 Genomic DNA Translation: VJZ19045.1
CAAQRO010000002 Genomic DNA Translation: VMC84555.1
CAATJI010000012 Genomic DNA Translation: VNR18128.1
CAAVGQ010000011 Genomic DNA Translation: VOS26714.1
CAAVJG010000007 Genomic DNA Translation: VOT66152.1
CAAVLL010000018 Genomic DNA Translation: VOV00187.1
CAAVNV010000001 Genomic DNA Translation: VOW19719.1
CAAVQC010000001 Genomic DNA Translation: VOX43430.1
CAAVRC010000004 Genomic DNA Translation: VOY04065.1
CAAVXM010000018 Genomic DNA Translation: VPB49632.1
CAAWAR010000001 Genomic DNA Translation: VPD15224.1
CAAWLZ010000001 Genomic DNA Translation: VPJ29833.1
CAAWYK010000001 Genomic DNA Translation: VPQ07424.1
CAAXJU010000001 Genomic DNA Translation: VPW25678.1
CAAXRD010000001 Genomic DNA Translation: VQA22225.1
CAAXUT010000001 Genomic DNA Translation: VQC19245.1
CAAZGS010000007 Genomic DNA Translation: VQW79307.1
CABAHI010000006 Genomic DNA Translation: VRL31086.1
CABBRG010000003 Genomic DNA Translation: VSE91768.1
CABBXZ010000003 Genomic DNA Translation: VSI54529.1
CABCSP010000013 Genomic DNA Translation: VST78624.1
CABCST010000001 Genomic DNA Translation: VST87437.1
CABDQT010000010 Genomic DNA Translation: VTH30183.1

NCBI Reference Sequences

More...
RefSeqi
WP_001810863.1, NZ_VUOQ01000030.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...
EnsemblBacteriai
CFP93833; CFP93833; ERS013931_01651
CGF05157; CGF05157; ERS019473_02169
CGF82462; CGF82462; ERS020491_01701
CIX01428; CIX01428; ERS019420_01918
CJC20211; CJC20211; ERS021449_01462
CJK60722; CJK60722; ERS022016_01923
CJY57797; CJY57797; ERS022329_01780
CKD77320; CKD77320; ERS232442_02192
CKF05991; CKF05991; ERS232512_01820
CMX24519; CMX24519; ERS077238_01933
CNA98787; CNA98787; ERS077235_02006
CNB21390; CNB21390; ERS077244_01962
COP01717; COP01717; ERS020534_01138
CRG00155; CRG00155; ERS020526_04105
KWX83346; KWX83346; AWW74_01190

Pathosystems Resource Integration Center (PATRIC)

More...
PATRICi
fig|1313.5273.peg.930

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CKOB01000030 Genomic DNA Translation: CIX01428.1
CGYF01000055 Genomic DNA Translation: CJB53646.1
CMJA01000017 Genomic DNA Translation: CKA59855.1
CMJU01000047 Genomic DNA Translation: CKB29730.1
CMMK01000023 Genomic DNA Translation: CKC85240.1
CMNT01000053 Genomic DNA Translation: CKD77320.1
CMOX01000026 Genomic DNA Translation: CKE34008.1
CMQE01000024 Genomic DNA Translation: CKF05991.1
CPKH01000036 Genomic DNA Translation: CMU45090.1
CGWM01000029 Genomic DNA Translation: CNZ49631.1
CROO01000033 Genomic DNA Translation: CON10056.1
FDMS01000014 Genomic DNA Translation: CVX51820.1
FDOR01000001 Genomic DNA Translation: CVX89495.1
WNHS01000036 Genomic DNA Translation: MTW24913.1
WNHY01000050 Genomic DNA Translation: MTW37389.1
VFBJ01000037 Genomic DNA Translation: TNW46316.1
FHJQ02000001 Genomic DNA Translation: VJM80405.1
CAAMCP010000027 Genomic DNA Translation: VJN04320.1
CAAMXR010000021 Genomic DNA Translation: VJZ19045.1
CAAQRO010000002 Genomic DNA Translation: VMC84555.1
CAATJI010000012 Genomic DNA Translation: VNR18128.1
CAAVGQ010000011 Genomic DNA Translation: VOS26714.1
CAAVJG010000007 Genomic DNA Translation: VOT66152.1
CAAVLL010000018 Genomic DNA Translation: VOV00187.1
CAAVNV010000001 Genomic DNA Translation: VOW19719.1
CAAVQC010000001 Genomic DNA Translation: VOX43430.1
CAAVRC010000004 Genomic DNA Translation: VOY04065.1
CAAVXM010000018 Genomic DNA Translation: VPB49632.1
CAAWAR010000001 Genomic DNA Translation: VPD15224.1
CAAWLZ010000001 Genomic DNA Translation: VPJ29833.1
CAAWYK010000001 Genomic DNA Translation: VPQ07424.1
CAAXJU010000001 Genomic DNA Translation: VPW25678.1
CAAXRD010000001 Genomic DNA Translation: VQA22225.1
CAAXUT010000001 Genomic DNA Translation: VQC19245.1
CAAZGS010000007 Genomic DNA Translation: VQW79307.1
CABAHI010000006 Genomic DNA Translation: VRL31086.1
CABBRG010000003 Genomic DNA Translation: VSE91768.1
CABBXZ010000003 Genomic DNA Translation: VSI54529.1
CABCSP010000013 Genomic DNA Translation: VST78624.1
CABCST010000001 Genomic DNA Translation: VST87437.1
CABDQT010000010 Genomic DNA Translation: VTH30183.1
RefSeqiWP_001810863.1, NZ_VUOQ01000030.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Genome annotation databases

EnsemblBacteriaiCFP93833; CFP93833; ERS013931_01651
CGF05157; CGF05157; ERS019473_02169
CGF82462; CGF82462; ERS020491_01701
CIX01428; CIX01428; ERS019420_01918
CJC20211; CJC20211; ERS021449_01462
CJK60722; CJK60722; ERS022016_01923
CJY57797; CJY57797; ERS022329_01780
CKD77320; CKD77320; ERS232442_02192
CKF05991; CKF05991; ERS232512_01820
CMX24519; CMX24519; ERS077238_01933
CNA98787; CNA98787; ERS077235_02006
CNB21390; CNB21390; ERS077244_01962
COP01717; COP01717; ERS020534_01138
CRG00155; CRG00155; ERS020526_04105
KWX83346; KWX83346; AWW74_01190
PATRICifig|1313.5273.peg.930

Family and domain databases

CDDicd01734, YlxS_C, 1 hit
Gene3Di3.30.300.70, 1 hit
HAMAPiMF_01077, RimP, 1 hit
InterProiView protein in InterPro
IPR003728, Ribosome_maturation_RimP
IPR028998, RimP_C
IPR036847, RimP_C_sf
IPR028989, RimP_N
IPR035956, RimP_N_sf
PANTHERiPTHR33867, PTHR33867, 1 hit
PfamiView protein in Pfam
PF02576, DUF150, 1 hit
PF17384, DUF150_C, 1 hit
SUPFAMiSSF74942, SSF74942, 1 hit
SSF75420, SSF75420, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A0B7LVV9_STREE
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A0B7LVV9
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: April 1, 2015
Last sequence update: April 1, 2015
Last modified: August 12, 2020
This is version 49 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again