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Protein
Submitted name:

Uncharacterized protein

Gene
N/A
Organism
Arundo donax (Giant reed) (Donax arundinaceus)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionDNA-bindingSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
OrganismiArundo donax (Giant reed) (Donax arundinaceus)Imported
Taxonomic identifieri35708 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladeArundinoideaeArundineaeArundo

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini79 – 103HSF_DOMAINInterPro annotationAdd BLAST25

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili212 – 239Sequence analysisAdd BLAST28

Sequence similaritiesi

Belongs to the HSF family.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysis

Family and domain databases

Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR000232 HSF_DNA-bd
IPR027725 HSF_fam
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PANTHERiPTHR10015 PTHR10015, 1 hit
PfamiView protein in Pfam
PF00447 HSF_DNA-bind, 1 hit
PRINTSiPR00056 HSFDOMAIN
SMARTiView protein in SMART
SM00415 HSF, 1 hit
SUPFAMiSSF46785 SSF46785, 1 hit
PROSITEiView protein in PROSITE
PS00434 HSF_DOMAIN, 1 hit

Sequencei

Sequence statusi: Complete.

A0A0A9DMW6-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAEQGGAAAA EAAASEPAPA PVPAPAVAEA AGQRSLPTPF LTKTYQLVDD
60 70 80 90 100
PAVDDVISWN EDGSTFVVWR PAEFARDLLP KYFKHNNFSS FVRQLNTYGF
110 120 130 140 150
RKIVPDRWEF ANDCFRRGEK RLLCDIHRRK VVPAPLSPAS GLATAAAAAA
160 170 180 190 200
SGAVTVAAAP IPMALPVALP GSPALSSDEQ VLSSNSGSGE EHPQAPSGSG
210 220 230 240 250
SGLGGGGSGS ASGDMGEENE RLRRENARLS RELGQMKKLC NNILLLMSKY
260 270 280 290 300
AASQQLDASA ALSSIVNCSG ESSEAVPPPP PLPAAILELM PSCPALATAA
310 320 330 340 350
AGLAADAEPD AAAMLFGVSI GLKRTRDDGG DGEEPADHGG GAEVKPETSD
360 370 380 390
PHSGSKEQSP DQHPWPIYRP TPVYHSTRAC NGRDPGAGSN QDGSNSR
Length:397
Mass (Da):41,107
Last modified:March 4, 2015 - v1
Checksum:i2568307CA5921DCA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GBRH01208794 Transcribed RNA Translation: JAD89101.1

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GBRH01208794 Transcribed RNA Translation: JAD89101.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR000232 HSF_DNA-bd
IPR027725 HSF_fam
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PANTHERiPTHR10015 PTHR10015, 1 hit
PfamiView protein in Pfam
PF00447 HSF_DNA-bind, 1 hit
PRINTSiPR00056 HSFDOMAIN
SMARTiView protein in SMART
SM00415 HSF, 1 hit
SUPFAMiSSF46785 SSF46785, 1 hit
PROSITEiView protein in PROSITE
PS00434 HSF_DOMAIN, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A0A9DMW6_ARUDO
AccessioniPrimary (citable) accession number: A0A0A9DMW6
Entry historyiIntegrated into UniProtKB/TrEMBL: March 4, 2015
Last sequence update: March 4, 2015
Last modified: September 12, 2018
This is version 15 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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