UniProtKB - A0A0A1I9R6 (A0A0A1I9R6_DANRE)
Protein
Submitted name:
Collagen type XV-B alpha 1 chain
Gene
col15a1b
Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Functioni
GO - Molecular functioni
- extracellular matrix structural constituent Source: GO_Central
GO - Biological processi
- extracellular matrix organization Source: GO_Central
- eye development Source: ZFIN
- regulation of motor neuron axon guidance Source: ZFIN
Names & Taxonomyi
Protein namesi | Submitted name: Collagen type XV-B alpha 1 chainImported |
Gene namesi | Name:col15a1bImported |
Organismi | Danio rerio (Zebrafish) (Brachydanio rerio)Imported |
Taxonomic identifieri | 7955 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Danionidae › Danioninae › Danio |
Organism-specific databases
ZFINi | ZDB-GENE-070912-689, col15a1b |
Subcellular locationi
Extracellular region or secreted
- extracellular matrix Source: GO_Central
- extracellular space Source: GO_Central
Other locations
- collagen trimer Source: UniProtKB-KW
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Signal peptidei | 1 – 17 | Sequence analysisAdd BLAST | 17 | |
ChainiPRO_5001985626 | 18 – 1245 | Sequence analysisAdd BLAST | 1228 |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 34 – 222 | LAM_G_DOMAINInterPro annotationAdd BLAST | 189 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 222 – 680 | DisorderedSequence analysisAdd BLAST | 459 | |
Regioni | 716 – 975 | DisorderedSequence analysisAdd BLAST | 260 | |
Regioni | 1022 – 1046 | DisorderedSequence analysisAdd BLAST | 25 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 223 – 238 | PolyampholyteSequence analysisAdd BLAST | 16 | |
Compositional biasi | 249 – 265 | PolyampholyteSequence analysisAdd BLAST | 17 | |
Compositional biasi | 302 – 322 | PolyampholyteSequence analysisAdd BLAST | 21 | |
Compositional biasi | 327 – 341 | Pro-richSequence analysisAdd BLAST | 15 | |
Compositional biasi | 413 – 430 | Pro-richSequence analysisAdd BLAST | 18 | |
Compositional biasi | 455 – 481 | Pro-richSequence analysisAdd BLAST | 27 | |
Compositional biasi | 545 – 564 | Pro-richSequence analysisAdd BLAST | 20 | |
Compositional biasi | 597 – 613 | Pro-richSequence analysisAdd BLAST | 17 | |
Compositional biasi | 814 – 829 | Pro-richSequence analysisAdd BLAST | 16 | |
Compositional biasi | 914 – 938 | Pro-richSequence analysisAdd BLAST | 25 | |
Compositional biasi | 953 – 967 | Pro-richSequence analysisAdd BLAST | 15 | |
Compositional biasi | 1024 – 1038 | PolarSequence analysisAdd BLAST | 15 |
Keywords - Domaini
CollagenImportedARBA annotation, SignalSequence analysisFamily and domain databases
CDDi | cd00247, Endostatin-like, 1 hit |
Gene3Di | 3.10.100.10, 1 hit |
InterProi | View protein in InterPro IPR016186, C-type_lectin-like/link_sf IPR008160, Collagen IPR010515, Collagenase_NC10/endostatin IPR013320, ConA-like_dom_sf IPR016187, CTDL_fold IPR001791, Laminin_G |
Pfami | View protein in Pfam PF01391, Collagen, 7 hits PF06482, Endostatin, 2 hits |
SMARTi | View protein in SMART SM00210, TSPN, 1 hit |
SUPFAMi | SSF49899, SSF49899, 1 hit SSF56436, SSF56436, 1 hit |
i Sequence
Sequence statusi: Complete.
A0A0A1I9R6-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MKFRLLSWLV GAHLALGYLS SALHVMEERG SKGHLILTDL VGMPLPPSVS
60 70 80 90 100
FITGYEGYPA YSFGPHANVG RLTQSFVPEP FFTDFAIIVT VKPSSSRGGV
110 120 130 140 150
LFAITDPSQT IVQLGLALTP VEDQTQRIVL YYSEPRSANS AEVASFKVPD
160 170 180 190 200
MTQQWSRFTL SVERQEVRLY MDCDEYHIAP FKRSQQPLSF KPGSGIFVAN
210 220 230 240 250
AGSTGLERFV GSIQQLVIKP DPRAAEEQCE EDDPSLQASG DRSGDGDYDD
260 270 280 290 300
EEEHARREET FGQTNNKEKT LRPTSPVEAP PIQSPDIEEG GFSGHVTPID
310 320 330 340 350
ERLLRGTYKT DETGERVGQK GERGEPGPAG PPGPPGPPGT SVPIRHSGQP
360 370 380 390 400
GPRGPQGPIG QPGGRGRPGK DGQPGSKGED GKPGQRGQTG PPGLPGESGV
410 420 430 440 450
KGEKGDPGVG RTGLPGPPGP PGPPGPSKPV KVPYGFDALG SGFGDADIDT
460 470 480 490 500
ELLRGPPGPP GPPGKPGPPG PNSPLGGLLP GPPGAPGKDG RDGQSGLPGV
510 520 530 540 550
PGQDGLPGQQ RPKGAKGEHG IRGPPGPKGE NGDPGQRGPP GPFGTMGPRG
560 570 580 590 600
LPGPPGPPGP PGPINNNFMV DTSKDFEGSG ESGSFLGTGI LKGYQGPPGL
610 620 630 640 650
PGPPGPQGPP GANGPPGSSV KGERGSPGPD GIHGLAGLPG ARGPKGDKGN
660 670 680 690 700
PGEKGERGRD GLNITGPPGP PGPPGPIINF QDLFLNDTAA KLNLTKIRGL
710 720 730 740 750
PGPMGPEGLP GRAGFPGPRG PKGEIGFPGV QGPPGLKGDK GEPGVSIAAD
760 770 780 790 800
GSIITSLRGP RGPKGTKGDI GLAGPHGIPG PIGPPGLKGG YGIPGRPGRP
810 820 830 840 850
GIAGRKGDKG DASGPPGPPG PPGPPGPPGR VIGLNGVNNN NSQQGDKGEK
860 870 880 890 900
GDEGNPGLSG TPVPHAYVGP KGDNGYNGQK GEKGDPGLPG PPGLPGRTGL
910 920 930 940 950
VGPKGESIVG PPGDTGAPGP PGLPGYGSPG PQGPPGGPGP SGTSSLYSSA
960 970 980 990 1000
ASLPGPPGPP GPPGVPGYGN PVSTYKNSQT LMRESSQAAE GTMGYVIDKS
1010 1020 1030 1040 1050
ELYIRVRGGW KKIELGELIP VPEDSSSSAL SQGLSRPSDR SVPRVHSQEL
1060 1070 1080 1090 1100
KSFLPGYNLL PDTTHSMPAL HLVALNAPFS GDMHGIRGAD YQCYQQARAR
1110 1120 1130 1140 1150
GLTSTYRAFL SSHLQDLSTI VKKADRFNLP VVNLKGEVLF SSWMAMFSGN
1160 1170 1180 1190 1200
GGVFDPLTPI YSFDGRNVLT DQAWSQKLVW HGSSTVGIRM TTNYCEAWRT
1210 1220 1230 1240
GDMAVTGQAS LLQTGRLLGQ HTRSCSNHFI ILCIENSYIQ HPGRN
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | LK391962 mRNA Translation: CDR98488.1 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | LK391962 mRNA Translation: CDR98488.1 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Organism-specific databases
ZFINi | ZDB-GENE-070912-689, col15a1b |
Family and domain databases
CDDi | cd00247, Endostatin-like, 1 hit |
Gene3Di | 3.10.100.10, 1 hit |
InterProi | View protein in InterPro IPR016186, C-type_lectin-like/link_sf IPR008160, Collagen IPR010515, Collagenase_NC10/endostatin IPR013320, ConA-like_dom_sf IPR016187, CTDL_fold IPR001791, Laminin_G |
Pfami | View protein in Pfam PF01391, Collagen, 7 hits PF06482, Endostatin, 2 hits |
SMARTi | View protein in SMART SM00210, TSPN, 1 hit |
SUPFAMi | SSF49899, SSF49899, 1 hit SSF56436, SSF56436, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | A0A0A1I9R6_DANRE | |
Accessioni | A0A0A1I9R6Primary (citable) accession number: A0A0A1I9R6 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | February 4, 2015 |
Last sequence update: | February 4, 2015 | |
Last modified: | October 7, 2020 | |
This is version 30 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |