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Protein
Submitted name:

Probable global transcription activator SNF2L2

Gene

SMARCA2

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Probable global transcription activator SNF2L2Imported
Gene namesi
Name:SMARCA2Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 9

Organism-specific databases

EuPathDBiHostDB:ENSG00000080503.20
HGNCiHGNC:11098 SMARCA2

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000080503

PTM / Processingi

Proteomic databases

PeptideAtlasiA0A0A0MT03

Expressioni

Gene expression databases

BgeeiENSG00000080503 Expressed in 237 organ(s), highest expression level in testis
ExpressionAtlasiA0A0A0MT03 baseline and differential

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini173 – 208QLQInterPro annotationAdd BLAST36

Phylogenomic databases

eggNOGiKOG0386 Eukaryota
COG0553 LUCA
COG5076 LUCA
GeneTreeiENSGT00550000074659

Family and domain databases

InterProiView protein in InterPro
IPR014978 Gln-Leu-Gln_QLQ
PfamiView protein in Pfam
PF08880 QLQ, 1 hit
SMARTiView protein in SMART
SM00951 QLQ, 1 hit
PROSITEiView protein in PROSITE
PS51666 QLQ, 1 hit

Sequence (1+)i

Sequence statusi: Fragment.

This entry has 1 described isoform and 34 potential isoforms that are computationally mapped.iShow all

A0A0A0MT03-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSTPTDPGAM PHPGPSPGPG PSPGPILGPS PGPGPSPGSV HSMMGPSPGP
60 70 80 90 100
PSVSHPMPTM GSTDFPQEGM HQMHKPIDGI HDKGIVEDIH CGSMKGTGMR
110 120 130 140 150
PPHPGMGPPQ SPMDQHSQGY MSPHPSPLGA PEHVSSPMSG GGPTPPQMPP
160 170 180 190 200
SQPGALIPGD PQAMSQPNRG PSPFSPVQLH QLRAQILAYK MLARGQPLPE
210
TLQLAVQGKR TLPGL
Length:215
Mass (Da):22,050
Last modified:February 17, 2016 - v5
Checksum:i5683789759C0A86A
GO

Computationally mapped potential isoform sequencesi

There are 34 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
P51531SMCA2_HUMAN
Probable global transcription activ...
SMARCA2 BAF190B, BRM, SNF2A, SNF2L2
1,590Annotation score:
F6VDE0F6VDE0_HUMAN
Probable global transcription activ...
SMARCA2
1,514Annotation score:
A0A1B0GWA8A0A1B0GWA8_HUMAN
Probable global transcription activ...
SMARCA2
279Annotation score:
A0A1B0GU54A0A1B0GU54_HUMAN
Probable global transcription activ...
SMARCA2
288Annotation score:
A0A0U1RQZ9A0A0U1RQZ9_HUMAN
Probable global transcription activ...
SMARCA2
1,428Annotation score:
B1ALF6B1ALF6_HUMAN
Probable global transcription activ...
SMARCA2
278Annotation score:
B4DNT1B4DNT1_HUMAN
Probable global transcription activ...
SMARCA2
276Annotation score:
F6XE55F6XE55_HUMAN
Probable global transcription activ...
SMARCA2
228Annotation score:
A0A0U1RQU0A0A0U1RQU0_HUMAN
Probable global transcription activ...
SMARCA2
200Annotation score:
A0A0U1RQX3A0A0U1RQX3_HUMAN
Probable global transcription activ...
SMARCA2
245Annotation score:
There are more potential isoformsShow all

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei215Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL138755 Genomic DNA No translation available.
AL359076 Genomic DNA No translation available.
AL591644 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000439732; ENSP00000409398; ENSG00000080503
UCSCiuc064rwc.1 human

Similar proteinsi

Entry informationi

Entry nameiA0A0A0MT03_HUMAN
AccessioniPrimary (citable) accession number: A0A0A0MT03
Entry historyiIntegrated into UniProtKB/TrEMBL: January 7, 2015
Last sequence update: February 17, 2016
Last modified: September 12, 2018
This is version 38 of the entry and version 5 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
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Main funding by: National Institutes of Health

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