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Protein
Submitted name:

CLK4-associating serine/arginine-rich protein

Gene

CLASRP

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
CLK4-associating serine/arginine-rich proteinImported
Submitted name:
Splicing factor, arginine/serine-rich 16 (Suppressor-of-white-apricot homolog, Drosophila), isoform CRA_aImported
Gene namesi
Name:CLASRPImported
Synonyms:SFRS16Imported
ORF Names:hCG_22138Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 19

Organism-specific databases

EuPathDBiHostDB:ENSG00000104859.14
HGNCiHGNC:17731 CLASRP

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000104859

PTM / Processingi

Proteomic databases

PeptideAtlasiA0A0A0MQS2
PRIDEiA0A0A0MQS2

Expressioni

Gene expression databases

BgeeiENSG00000104859 Expressed in 222 organ(s), highest expression level in left lobe of thyroid gland
ExpressionAtlasiA0A0A0MQS2 baseline and differential

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini39 – 171DRY_EERYInterPro annotationAdd BLAST133

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili587 – 647Sequence analysisAdd BLAST61

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG2548 Eukaryota
COG0303 LUCA
GeneTreeiENSGT00730000111260
KOiK13168
OMAiMQKALNK
OrthoDBiEOG091G0J7A

Family and domain databases

InterProiView protein in InterPro
IPR019147 SWAP_N_domain
PfamiView protein in Pfam
PF09750 DRY_EERY, 1 hit
SMARTiView protein in SMART
SM01141 DRY_EERY, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 6 potential isoforms that are computationally mapped.Show allAlign All

A0A0A0MQS2-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MWHEARKHER KLRGMMVDYK KRAERRREYY EKIKKDPAQF LQVHGRACKV
60 70 80 90 100
HLDSAVALAA ESPVNMMPWQ GDTNNMIDRF DVRAHLDHIP DYTPPLLTTI
110 120 130 140 150
SPEQESDERK CNYERYRGLV QNDFAGISEE QCLYQIYIDE LYGGLQRPSE
160 170 180 190 200
DEKKKLAEKK ASIGYTYEDS TVAEVEKAAE KPEEEESAAE EESNSDEDEV
210 220 230 240 250
IPDIDVEVDV DELNQEQVAD LNKQATTYGM ADGDFVRMLR KDKEEAEAIK
260 270 280 290 300
HAKALEEEKA MYSGRRSRRQ RREFREKRLR GRKISPPSYA RRDSPTYDPY
310 320 330 340 350
KRSPSESSSE SRSRSRSPTP GREEKITFIT SFGGSDEEAA AAAAAAAASG
360 370 380 390 400
VTTGKPPAPP QPGGPAPGRN ASARRRSSSS SSSSSASRTS SSRSSSRSSS
410 420 430 440 450
RSRRGGGYYR SGRHARSRSR SWSRSRSRSR RYSRSRSRGR RHSGGGSRDG
460 470 480 490 500
HRYSRSPARR GGYGPRRRSR SRSHSGDRYR RGGRGLRHHS SSRSRSSWSL
510 520 530 540 550
SPSRSRSLTR SRSHSPSPSQ SRSRSRSRSQ SPSPSPAREK LTRPAASPAV
560 570 580 590 600
GEKLKKTEPA AGKETGAAKP KLTPQEKLKL RMQKALNRQF KADKKAAQEK
610 620 630 640 650
MIQQEHERQE REDELRAMAR KIRMKERERR EKEREEWERQ YSRQSRSPSP
660 670
RYSREYSSSR RRSRSRSRSP HYRH
Length:674
Mass (Da):77,162
Last modified:January 7, 2015 - v1
Checksum:iA54F935EBEC56FEB
GO

Computationally mapped potential isoform sequencesi

There are 6 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q8N2M8CLASR_HUMAN
CLK4-associating serine/arginine ri...
CLASRP SFRS16, SWAP2, UNQ2428/PRO4988
674Annotation score:
F5H0Q6F5H0Q6_HUMAN
CLK4-associating serine/arginine-ri...
CLASRP SFRS16, hCG_22138
655Annotation score:
K7EP11K7EP11_HUMAN
CLK4-associating serine/arginine-ri...
CLASRP
131Annotation score:
K7EKC9K7EKC9_HUMAN
CLK4-associating serine/arginine-ri...
CLASRP
86Annotation score:
K7EM61K7EM61_HUMAN
CLK4-associating serine/arginine-ri...
CLASRP
188Annotation score:
K7EKR8K7EKR8_HUMAN
CLK4-associating serine/arginine-ri...
CLASRP
81Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC011489 Genomic DNA No translation available.
KF456584 Genomic DNA No translation available.
CH471126 Genomic DNA Translation: EAW57317.1
RefSeqiNP_008987.2, NM_007056.2
UniGeneiHs.466917

Genome annotation databases

EnsembliENST00000221455; ENSP00000221455; ENSG00000104859
GeneIDi11129
KEGGihsa:11129
UCSCiuc002pak.3 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC011489 Genomic DNA No translation available.
KF456584 Genomic DNA No translation available.
CH471126 Genomic DNA Translation: EAW57317.1
RefSeqiNP_008987.2, NM_007056.2
UniGeneiHs.466917

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PeptideAtlasiA0A0A0MQS2
PRIDEiA0A0A0MQS2

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000221455; ENSP00000221455; ENSG00000104859
GeneIDi11129
KEGGihsa:11129
UCSCiuc002pak.3 human

Organism-specific databases

CTDi11129
EuPathDBiHostDB:ENSG00000104859.14
HGNCiHGNC:17731 CLASRP
OpenTargetsiENSG00000104859
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG2548 Eukaryota
COG0303 LUCA
GeneTreeiENSGT00730000111260
KOiK13168
OMAiMQKALNK
OrthoDBiEOG091G0J7A

Miscellaneous databases

ChiTaRSiCLASRP human
GenomeRNAii11129

Gene expression databases

BgeeiENSG00000104859 Expressed in 222 organ(s), highest expression level in left lobe of thyroid gland
ExpressionAtlasiA0A0A0MQS2 baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR019147 SWAP_N_domain
PfamiView protein in Pfam
PF09750 DRY_EERY, 1 hit
SMARTiView protein in SMART
SM01141 DRY_EERY, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A0A0MQS2_HUMAN
AccessioniPrimary (citable) accession number: A0A0A0MQS2
Entry historyiIntegrated into UniProtKB/TrEMBL: January 7, 2015
Last sequence update: January 7, 2015
Last modified: November 7, 2018
This is version 39 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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