Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Leucine-rich repeat-containing protein 8A

Gene

N301_12730

Organism
Charadrius vociferus (Killdeer) (Aegialitis vocifera)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Leucine-rich repeat-containing protein 8AImported
Gene namesi
ORF Names:N301_12730Imported
OrganismiCharadrius vociferus (Killdeer) (Aegialitis vocifera)Imported
Taxonomic identifieri50402 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeCharadriiformesCharadriidaeCharadrius
Proteomesi
  • UP000053858 Componenti: Unassembled WGS sequence

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei27 – 45HelicalSequence analysisAdd BLAST19
Transmembranei124 – 144HelicalSequence analysisAdd BLAST21
Transmembranei268 – 286HelicalSequence analysisAdd BLAST19
Transmembranei322 – 344HelicalSequence analysisAdd BLAST23

Keywords - Cellular componenti

Membrane

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 340Pannexin_likeInterPro annotationAdd BLAST340

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Family and domain databases

Gene3Di3.80.10.10, 2 hits
InterProiView protein in InterPro
IPR001611 Leu-rich_rpt
IPR003591 Leu-rich_rpt_typical-subtyp
IPR032675 LRR_dom_sf
IPR038960 LRRC8
IPR021040 LRRC8_Pannexin-like
PANTHERiPTHR43945 PTHR43945, 1 hit
PfamiView protein in Pfam
PF13855 LRR_8, 3 hits
PF12534 Pannexin_like, 1 hit
SMARTiView protein in SMART
SM00369 LRR_TYP, 8 hits
PROSITEiView protein in PROSITE
PS51450 LRR, 12 hits

Sequencei

Sequence statusi: Complete.

A0A0A0AP30-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MIPVTELRYF ADTQPAYRIL KPWWDVFTDY ISIVMLMIAV FGGTLQVTQD
60 70 80 90 100
KMICLPCKWV TKDSCNDSVR GWTAATPERT YYNSSLVPST DTGPTGIRYD
110 120 130 140 150
LDRHQYNYVD AVCYENRLHW FAKYFPYLVL LHTLIFLACS NFWFKFPRTS
160 170 180 190 200
SKLEHFVSIL LKCFDSPWTT RALSETVVEE SDTKPAFGKM NGSMDKKSST
210 220 230 240 250
VSEDVEATVP MLQRTKSRIE QGIVDRSETG VLDKKEGEQA KALFEKVKKF
260 270 280 290 300
RTHVEEGDIV YRLYMRQTII KVIKFILIIC YTVYYVNNIT FDVDCKVDIE
310 320 330 340 350
SLTGYRMYRC AHPLATLFKI LASFYISLVI FYGFICMYTL WWMLRRSLKK
360 370 380 390 400
YSFESIREES SYSDIPDVKN DFAFMLHLID QYDPLYSKRF AVFLSEVSEN
410 420 430 440 450
KLRQLNLNNE WTLEKLRQRI TKNSQDKLEL HLFMLSGIPD TVFDLIELEV
460 470 480 490 500
LKLELIPDVT IPPSIAQLTS LKELWLYHTA AKIEAPALAF LRENLKSLHI
510 520 530 540 550
KFTDIKEIPL WIYSLKTLEE LHLTGNLSAE NNRYIVIDGL RELKRLKVLR
560 570 580 590 600
LKSNLTKLPQ VVTDVGVHLQ KLSINNEGTK LIVLNSLKKM VNLTELELIR
610 620 630 640 650
CDLERIPHSI FSLHNLQEID LKDNNLKTIE EIISFQHLHR LTCLKLWYNH
660 670 680 690 700
IAYIPMQIGN LTNLERLYLN RNKIEKIPTQ LFYCRKLRYL DLSHNNLTSI
710 720 730 740 750
PPDIGLLQNL QNLAVTANRI ESLPPELFQC RKLRTLNLGN NVLQSLPSRV
760 770 780 790 800
GELTNLSQIE LRGNRLECLP VELGECPLLK RTGLVVEEDL FNTLPLEVKE
810
RLWRADKEQA
Length:810
Mass (Da):94,412
Last modified:January 7, 2015 - v1
Checksum:iCD6350D90499C346
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KL872462 Genomic DNA Translation: KGL95756.1
RefSeqiXP_009886323.1, XM_009888021.1

Genome annotation databases

GeneIDi104289119

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KL872462 Genomic DNA Translation: KGL95756.1
RefSeqiXP_009886323.1, XM_009888021.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi104289119

Organism-specific databases

CTDi56262

Family and domain databases

Gene3Di3.80.10.10, 2 hits
InterProiView protein in InterPro
IPR001611 Leu-rich_rpt
IPR003591 Leu-rich_rpt_typical-subtyp
IPR032675 LRR_dom_sf
IPR038960 LRRC8
IPR021040 LRRC8_Pannexin-like
PANTHERiPTHR43945 PTHR43945, 1 hit
PfamiView protein in Pfam
PF13855 LRR_8, 3 hits
PF12534 Pannexin_like, 1 hit
SMARTiView protein in SMART
SM00369 LRR_TYP, 8 hits
PROSITEiView protein in PROSITE
PS51450 LRR, 12 hits
ProtoNetiSearch...

Entry informationi

Entry nameiA0A0A0AP30_CHAVO
AccessioniPrimary (citable) accession number: A0A0A0AP30
Entry historyiIntegrated into UniProtKB/TrEMBL: January 7, 2015
Last sequence update: January 7, 2015
Last modified: June 20, 2018
This is version 20 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again