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Entry version 33 (02 Dec 2020)
Sequence version 1 (26 Nov 2014)
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Protein

60S ribosomal protein L36

Gene
N/A
Organism
Triticum aestivum (Wheat)
Status
Unreviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein inferred from homologyi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotationARBA annotation

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
60S ribosomal protein L36UniRule annotation
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiTriticum aestivum (Wheat)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri4565 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliopsidaLiliopsidaPoalesPoaceaeBOP cladePooideaeTriticodaeTriticeaeTriticinaeTriticum
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000019116 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Unplaced

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
A0A096UNN1, baseline and differential

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
4565.Traes_3DL_F1AA506F4.1

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni1 – 36DisorderedSequence analysisAdd BLAST36
Regioni79 – 112DisorderedSequence analysisAdd BLAST34

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi21 – 36PolyampholyteSequence analysisAdd BLAST16

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the eukaryotic ribosomal protein eL36 family.UniRule annotationARBA annotation

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG3452, Eukaryota

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_140672_0_0_1

Identification of Orthologs from Complete Genome Data

More...
OMAi
GMAPYEK

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
1.10.10.1760, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR038097, L36e_sf
IPR000509, Ribosomal_L36e

The PANTHER Classification System

More...
PANTHERi
PTHR10114, PTHR10114, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF01158, Ribosomal_L36e, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS01190, RIBOSOMAL_L36E, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

A0A096UNN1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAPSQPKSGL FVGINKGHVV TKRELPPRPS DRKGKGTKRV LFVRNLIREV
60 70 80 90 100
AGFAPYEKRI TELLKVGKDK RALKVAKRKL GTHKRAKKKR EEMSSVLRKM
110
RSGGGGAADK KK
Length:112
Mass (Da):12,502
Last modified:November 26, 2014 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iC611328232B5E32C
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A3B6H174A0A3B6H174_WHEAT
60S ribosomal protein L36
101Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Genome annotation databases

Ensembl plant genome annotation project

More...
EnsemblPlantsi
TraesCS3A02G358500.1; TraesCS3A02G358500.1; TraesCS3A02G358500
TraesCS3D02G352800.1; TraesCS3D02G352800.1; TraesCS3D02G352800

Gramene; a comparative resource for plants

More...
Gramenei
TraesCAD_scaffold_025362_01G000200.1; TraesCAD_scaffold_025362_01G000200.1; TraesCAD_scaffold_025362_01G000200
TraesCAD_scaffold_103994_01G000200.1; TraesCAD_scaffold_103994_01G000200.1; TraesCAD_scaffold_103994_01G000200
TraesCLE_scaffold_117172_01G000100.1; TraesCLE_scaffold_117172_01G000100.1; TraesCLE_scaffold_117172_01G000100
TraesCLE_scaffold_143411_01G000100.1; TraesCLE_scaffold_143411_01G000100.1; TraesCLE_scaffold_143411_01G000100
TraesCS3A02G358500.1; TraesCS3A02G358500.1; TraesCS3A02G358500
TraesCS3D02G352800.1; TraesCS3D02G352800.1; TraesCS3D02G352800
TraesPAR_scaffold_040784_01G000200.1; TraesPAR_scaffold_040784_01G000200.1; TraesPAR_scaffold_040784_01G000200
TraesPAR_scaffold_125508_01G000200.1; TraesPAR_scaffold_125508_01G000200.1; TraesPAR_scaffold_125508_01G000200
TraesROB_scaffold_093345_01G000200.1; TraesROB_scaffold_093345_01G000200.1; TraesROB_scaffold_093345_01G000200
TraesROB_scaffold_113842_01G000100.1; TraesROB_scaffold_113842_01G000100.1; TraesROB_scaffold_113842_01G000100
TraesWEE_scaffold_042629_01G000100.1; TraesWEE_scaffold_042629_01G000100.1; TraesWEE_scaffold_042629_01G000100
TraesWEE_scaffold_135345_01G000100.1; TraesWEE_scaffold_135345_01G000100.1; TraesWEE_scaffold_135345_01G000100

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

STRINGi4565.Traes_3DL_F1AA506F4.1

Genome annotation databases

EnsemblPlantsiTraesCS3A02G358500.1; TraesCS3A02G358500.1; TraesCS3A02G358500
TraesCS3D02G352800.1; TraesCS3D02G352800.1; TraesCS3D02G352800
GrameneiTraesCAD_scaffold_025362_01G000200.1; TraesCAD_scaffold_025362_01G000200.1; TraesCAD_scaffold_025362_01G000200
TraesCAD_scaffold_103994_01G000200.1; TraesCAD_scaffold_103994_01G000200.1; TraesCAD_scaffold_103994_01G000200
TraesCLE_scaffold_117172_01G000100.1; TraesCLE_scaffold_117172_01G000100.1; TraesCLE_scaffold_117172_01G000100
TraesCLE_scaffold_143411_01G000100.1; TraesCLE_scaffold_143411_01G000100.1; TraesCLE_scaffold_143411_01G000100
TraesCS3A02G358500.1; TraesCS3A02G358500.1; TraesCS3A02G358500
TraesCS3D02G352800.1; TraesCS3D02G352800.1; TraesCS3D02G352800
TraesPAR_scaffold_040784_01G000200.1; TraesPAR_scaffold_040784_01G000200.1; TraesPAR_scaffold_040784_01G000200
TraesPAR_scaffold_125508_01G000200.1; TraesPAR_scaffold_125508_01G000200.1; TraesPAR_scaffold_125508_01G000200
TraesROB_scaffold_093345_01G000200.1; TraesROB_scaffold_093345_01G000200.1; TraesROB_scaffold_093345_01G000200
TraesROB_scaffold_113842_01G000100.1; TraesROB_scaffold_113842_01G000100.1; TraesROB_scaffold_113842_01G000100
TraesWEE_scaffold_042629_01G000100.1; TraesWEE_scaffold_042629_01G000100.1; TraesWEE_scaffold_042629_01G000100
TraesWEE_scaffold_135345_01G000100.1; TraesWEE_scaffold_135345_01G000100.1; TraesWEE_scaffold_135345_01G000100

Phylogenomic databases

eggNOGiKOG3452, Eukaryota
HOGENOMiCLU_140672_0_0_1
OMAiGMAPYEK

Gene expression databases

ExpressionAtlasiA0A096UNN1, baseline and differential

Family and domain databases

Gene3Di1.10.10.1760, 1 hit
InterProiView protein in InterPro
IPR038097, L36e_sf
IPR000509, Ribosomal_L36e
PANTHERiPTHR10114, PTHR10114, 1 hit
PfamiView protein in Pfam
PF01158, Ribosomal_L36e, 1 hit
PROSITEiView protein in PROSITE
PS01190, RIBOSOMAL_L36E, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A096UNN1_WHEAT
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A096UNN1
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: November 26, 2014
Last sequence update: November 26, 2014
Last modified: December 2, 2020
This is version 33 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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