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Protein
Submitted name:

Long-chain-fatty-acid-CoA ligase-like protein

Gene

100282439

Organism
Zea mays (Maize)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
Long-chain-fatty-acid-CoA ligase-like proteinImported
Gene namesi
Name:100282439Imported
ORF Names:ZEAMMB73_Zm00001d043376Imported
OrganismiZea mays (Maize)Imported
Taxonomic identifieri4577 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogonodaeAndropogoneaeTripsacinaeZea
Proteomesi
  • UP000007305 Componenti: Chromosome 3

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PaxDbiA0A096TWZ2

Expressioni

Gene expression databases

ExpressionAtlasiA0A096TWZ2 baseline and differential

Interactioni

Protein-protein interaction databases

STRINGi4577.GRMZM2G460078_P01

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini134 – 515AMP-bindingInterPro annotationAdd BLAST382
Domaini530 – 615AMP-binding_CInterPro annotationAdd BLAST86

Phylogenomic databases

OMAiVGMAISC
OrthoDBiEOG0936061Z

Family and domain databases

InterProiView protein in InterPro
IPR025110 AMP-bd_C
IPR020845 AMP-binding_CS
IPR000873 AMP-dep_Synth/Lig
PfamiView protein in Pfam
PF00501 AMP-binding, 1 hit
PF13193 AMP-binding_C, 1 hit
PROSITEiView protein in PROSITE
PS00455 AMP_BINDING, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 4 potential isoforms that are computationally mapped.Show allAlign All

A0A096TWZ2-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MRTQAWGRGA VARLMTPFNR RAAHASSPHL LRACSSASYT IALARLRRHF
60 70 80 90 100
TSSASFSPAY SARQDTHTFM EVVQEVLRHG SADSVRAVIR ANKKSYSLVQ
110 120 130 140 150
LIAASFDVYN ILCSKNMTPN GMQDSSSKGR NGTGFLHGAR VGIVAKPSPE
160 170 180 190 200
FVAGVFGTWL SGGVAVPLAL SYPEAELLHV MNDSDISMVL STKEHHEIME
210 220 230 240 250
NLSIKCSAYC SILPSVTSIP SEINPQEPSS NEAISSVSTL ITETNSSKKI
260 270 280 290 300
KGDDPALILY TSGTTGKPKG VVHTHEGILS QVQILSEAWG YRSEDQFLHC
310 320 330 340 350
LPLHHVHGLF NALFAPLYSG SVVEFIPKFS VSGIWQRWRE SYPNDASKST
360 370 380 390 400
EAITVFTGVP TMYTRLLQGY DSMDPDQKSA SSYAAKHLRL MMCGSSALPS
410 420 430 440 450
PLMKRWEEVT GHRLLERYGM TEFVMALSNP LHGIRKEGTV GKPLPRIEAK
460 470 480 490 500
IIMEDGAETT TGVGELCIRS PSLFKEYWKR PEVTAESFID GGFFKTGDTV
510 520 530 540 550
TVDEEGYFII LGRTNADIMK FGGYKLSALE IEAVLLEHDA VLECAVLGLP
560 570 580 590 600
DEAYGEVICA IIVPKEDAKK KAGQDSKPAL TLEALTSWSK DKLAPYKIPT
610 620
RLYLWDSLPR NAMGKVNKKE LKKLLGA
Length:627
Mass (Da):68,775
Last modified:November 26, 2014 - v1
Checksum:iB3AF1E8AE26C3A38
GO

Computationally mapped potential isoform sequencesi

There are 4 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A1D6NAZ4A0A1D6NAZ4_MAIZE
Long-chain-fatty-acid-CoA ligase-li...
100282439 ZEAMMB73_Zm00001d043376
377Annotation score:
A0A1D6NAZ7A0A1D6NAZ7_MAIZE
Long-chain-fatty-acid-CoA ligase-li...
100282439 ZEAMMB73_Zm00001d043376
335Annotation score:
A0A1D6NAZ5A0A1D6NAZ5_MAIZE
Long-chain-fatty-acid-CoA ligase-li...
100282439 ZEAMMB73_Zm00001d043376
316Annotation score:
A0A1D6NAZ3A0A1D6NAZ3_MAIZE
Long-chain-fatty-acid-CoA ligase-li...
100282439 ZEAMMB73_Zm00001d043376
439Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM007649 Genomic DNA Translation: ONM37712.1
RefSeqiXP_008672869.1, XM_008674647.1
UniGeneiZm.9526

Genome annotation databases

EnsemblPlantsiZm00001d043376_T006; Zm00001d043376_P006; Zm00001d043376
GeneIDi100282439
GrameneiZm00001d043376_T006; Zm00001d043376_P006; Zm00001d043376

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM007649 Genomic DNA Translation: ONM37712.1
RefSeqiXP_008672869.1, XM_008674647.1
UniGeneiZm.9526

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi4577.GRMZM2G460078_P01

Proteomic databases

PaxDbiA0A096TWZ2

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiZm00001d043376_T006; Zm00001d043376_P006; Zm00001d043376
GeneIDi100282439
GrameneiZm00001d043376_T006; Zm00001d043376_P006; Zm00001d043376

Phylogenomic databases

OMAiVGMAISC
OrthoDBiEOG0936061Z

Gene expression databases

ExpressionAtlasiA0A096TWZ2 baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR025110 AMP-bd_C
IPR020845 AMP-binding_CS
IPR000873 AMP-dep_Synth/Lig
PfamiView protein in Pfam
PF00501 AMP-binding, 1 hit
PF13193 AMP-binding_C, 1 hit
PROSITEiView protein in PROSITE
PS00455 AMP_BINDING, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A096TWZ2_MAIZE
AccessioniPrimary (citable) accession number: A0A096TWZ2
Entry historyiIntegrated into UniProtKB/TrEMBL: November 26, 2014
Last sequence update: November 26, 2014
Last modified: November 7, 2018
This is version 35 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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