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Protein
Submitted name:

Tigger transposable element derived 7

Gene

TIGD7

Organism
Papio anubis (Olive baboon)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi28 – 48H-T-H motifPROSITE-ProRule annotationAdd BLAST21

GO - Molecular functioni

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Tigger transposable element derived 7Imported
Gene namesi
Name:TIGD7Imported
OrganismiPapio anubis (Olive baboon)Imported
Taxonomic identifieri9555 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniCercopithecidaeCercopithecinaePapio
Proteomesi
  • UP000028761 Componenti: Chromosome 20

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 52HTH psq-typeInterPro annotationAdd BLAST52
Domaini68 – 139HTH CENPB-typeInterPro annotationAdd BLAST72

Phylogenomic databases

GeneTreeiENSGT00760000119149
OMAiRHAIGNR
OrthoDBiEOG091G05QK

Family and domain databases

Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR004875 DDE_SF_endonuclease_dom
IPR009057 Homeobox-like_sf
IPR006600 HTH_CenpB_DNA-bd_dom
IPR007889 HTH_Psq
IPR036388 WH-like_DNA-bd_sf
PfamiView protein in Pfam
PF04218 CENP-B_N, 1 hit
PF03184 DDE_1, 1 hit
PF03221 HTH_Tnp_Tc5, 1 hit
SMARTiView protein in SMART
SM00674 CENPB, 1 hit
SUPFAMiSSF46689 SSF46689, 2 hits
PROSITEiView protein in PROSITE
PS51253 HTH_CENPB, 1 hit
PS50960 HTH_PSQ, 1 hit

Sequencei

Sequence statusi: Complete.

A0A096NLB6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNKRGKYTTL NLEEKMKVLS RIEAGRSLKS VMDEFGISKS TFYDIKKNKK
60 70 80 90 100
LILDFVLKQD MPLVGAEKRK RTTGAKYGDV DDAVYMWYQQ KRSAGVPVRG
110 120 130 140 150
VELQAAAERF AQCFGRTDFK ASTGWLFRFR NRHAIGNRKG CGEQVLSSVS
160 170 180 190 200
ENVEPFRQKL SMIIKEEKLC LAQLYSGDET DLFWKSMPEN SQASRKDICL
210 220 230 240 250
PGKKINKERL SALLCANADG THKLKSIIIG KSKLPKSVKE DTSTLPVIYK
260 270 280 290 300
PSKDVWFTRE LFSEWFFQNF VPEVRHFQLN VLRFHEEDIR ALLLLDSCPA
310 320 330 340 350
HPSSESLTSE DGRIKCMFFP YNTSTLIQPM NQGVILSCKR LYRWKQLEES
360 370 380 390 400
LVIFEESDDE QEKGDKGVSK IKMYNIKSAI FNWAKSWDEV KQITIANAWE
410 420 430 440 450
NLLYKKEPEY DFQGLEDGDY REILEKCGEL ETKLDDNRVW LNGDEGKGCL
460 470 480 490 500
LKTKGGITKE VVQKGGETEK QTAEFKLSAV RENLDYLLDF VDATPEFQRF
510 520 530 540
HFTLKEMQQE IVKKQFQSKI RSRTGSFLKP RPHNIKDSFS GPSTSGSNH
Length:549
Mass (Da):63,201
Last modified:February 28, 2018 - v2
Checksum:i592E743CE2460FD2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AHZZ02018228 Genomic DNA No translation available.
RefSeqiXP_009194095.1, XM_009195831.2
XP_009194096.1, XM_009195832.2
XP_009194097.1, XM_009195833.2

Genome annotation databases

EnsembliENSPANT00000019567; ENSPANP00000013774; ENSPANG00000008160
GeneIDi101026556

Similar proteinsi

Entry informationi

Entry nameiA0A096NLB6_PAPAN
AccessioniPrimary (citable) accession number: A0A096NLB6
Entry historyiIntegrated into UniProtKB/TrEMBL: November 26, 2014
Last sequence update: February 28, 2018
Last modified: June 20, 2018
This is version 21 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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