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Entry version 30 (05 Jun 2019)
Sequence version 1 (26 Nov 2014)
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Protein
Submitted name:

Similar to RIKEN cDNA D630029K19

Gene

RGD1307100

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Similar to RIKEN cDNA D630029K19Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:RGD1307100Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiRattus norvegicus (Rat)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10116 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000002494 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 2

Organism-specific databases

Rat genome database

More...
RGDi
1307100 RGD1307100

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular_location_section">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei27 – 46HelicalSequence analysisAdd BLAST20

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Membrane

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Proteomic databases

jPOST - Japan Proteome Standard Repository/Database

More...
jPOSTi
A0A096MJT6

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
A0A096MJT6

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSRNOG00000038436 Expressed in 10 organ(s), highest expression level in brain

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
A0A096MJT6 baseline and differential

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
10116.ENSRNOP00000068256

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini4387 – 4991FSA_CInterPro annotationAdd BLAST605

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni692 – 721DisorderedSequence analysisAdd BLAST30
Regioni1190 – 1259DisorderedSequence analysisAdd BLAST70
Regioni1272 – 1311DisorderedSequence analysisAdd BLAST40
Regioni1343 – 1376DisorderedSequence analysisAdd BLAST34
Regioni1399 – 1425DisorderedSequence analysisAdd BLAST27
Regioni1521 – 1544DisorderedSequence analysisAdd BLAST24
Regioni1927 – 1991DisorderedSequence analysisAdd BLAST65
Regioni2367 – 2387DisorderedSequence analysisAdd BLAST21
Regioni2400 – 2420DisorderedSequence analysisAdd BLAST21
Regioni2598 – 2682DisorderedSequence analysisAdd BLAST85
Regioni2928 – 2962DisorderedSequence analysisAdd BLAST35
Regioni3614 – 3662DisorderedSequence analysisAdd BLAST49
Regioni3686 – 3744DisorderedSequence analysisAdd BLAST59
Regioni3821 – 3843DisorderedSequence analysisAdd BLAST23
Regioni4090 – 4145DisorderedSequence analysisAdd BLAST56
Regioni4171 – 4195DisorderedSequence analysisAdd BLAST25
Regioni4325 – 4396DisorderedSequence analysisAdd BLAST72

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi1194 – 1212PolyampholyteSequence analysisAdd BLAST19
Compositional biasi1219 – 1245PolarSequence analysisAdd BLAST27
Compositional biasi1280 – 1311PolarSequence analysisAdd BLAST32
Compositional biasi1357 – 1376PolarSequence analysisAdd BLAST20
Compositional biasi1927 – 1973PolarSequence analysisAdd BLAST47
Compositional biasi2622 – 2642PolarSequence analysisAdd BLAST21
Compositional biasi2643 – 2682PolyampholyteSequence analysisAdd BLAST40
Compositional biasi2946 – 2962PolarSequence analysisAdd BLAST17
Compositional biasi3630 – 3647PolyampholyteSequence analysisAdd BLAST18
Compositional biasi3686 – 3709PolarSequence analysisAdd BLAST24
Compositional biasi3713 – 3744PolyampholyteSequence analysisAdd BLAST32
Compositional biasi3821 – 3839PolyampholyteSequence analysisAdd BLAST19
Compositional biasi4090 – 4117PolarSequence analysisAdd BLAST28
Compositional biasi4125 – 4145PolarSequence analysisAdd BLAST21

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG3596 Eukaryota
ENOG410XT7P LUCA

Ensembl GeneTree

More...
GeneTreei
ENSGT00640000091487

Identification of Orthologs from Complete Genome Data

More...
OMAi
VPTTCNT

Database of Orthologous Groups

More...
OrthoDBi
77777at2759

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR018863 Fragile_site-assoc_C
IPR033616 KIAA1109

The PANTHER Classification System

More...
PANTHERi
PTHR31640 PTHR31640, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF10479 FSA_C, 2 hits

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM01220 FSA_C, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 5 potential isoforms that are computationally mapped.Show allAlign All

A0A096MJT6-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MDQRKNDSIV PSITQLEDFL TEHNSNVVWL LVATILSCGW IIYLTYYNSR
60 70 80 90 100
NVGLILTLVL NRLYKHGYIH IGSFSFSVLS GKVMVREIYY ITEDMSVRIQ
110 120 130 140 150
DGFIIFRWWK MYNPKQKQHD PKAETRLYIT VNDFEFHVYN RSDLYGRLQE
160 170 180 190 200
LFGLEPTIIP PKKDDDKTRE NGRTRTQSKI ERVKVKTESQ DPTSSWRSLI
210 220 230 240 250
PVIKVNVSTG RLAFGNHYQP QTLCINFDDA FLTYTTKPPS SHLDQFMHIV
260 270 280 290 300
KGKLENVRVM LVPSPRYVGL QNDEPPRLMG EGFVVMQSND VDIYYYMDEP
310 320 330 340 350
GLVPEETEES IEGEISSEDC KLQDLPPCWG LDIVCGKGTD FNYGPWADRQ
360 370 380 390 400
RDCLWKFFFP PDYQVLKVSE IAQPGRPRQI LAFELRMNII ADATIDLLFT
410 420 430 440 450
KNRETNAVHV NVGAGSYLEI NIPMTVEESG YTPAIKGQLL HVDATTSMQY
460 470 480 490 500
RTLLEAEMLA FHINASYPRI WNMPQTWQCE LEVYKATYHF IFAQKNFFTD
510 520 530 540 550
LIQDWSSDNA PDIFSFVPYT WNFKIMFHQF EMIWAANQHN WIDCSTKQQE
560 570 580 590 600
NVYLAACGET LNIDFSLPFT DFVPATCNTR FSLRGEDVDL HLFLPDCHPS
610 620 630 640 650
KYSLFMLVKN CHPNKMAAEA GVPAECQSGQ KTVKPKWRNV TQEKAGWVEC
660 670 680 690 700
WTVPSVMLTI DYTWHPIYPQ KADEQLKQSL SEMEETMLSV LRPAQKPSER
710 720 730 740 750
VVSSPSTSPR PPVDPSELPP DKLHVEMELS PDSQITLYGP LLNAFLCIKE
760 770 780 790 800
NYFGEDDMYM DFEEVISSPV LSLSTSSSSG WTAVGMDSDK RENESSAKSI
810 820 830 840 850
HPLALRPWDI TVLVNLYKVH GRLPVHGTTD GPECPAAFLE RLCFEMKKGF
860 870 880 890 900
RETMLQLVLS PLNVFVSDNY QQRPPTDEVL REGHINLSGL QLRAHAMFSA
910 920 930 940 950
EGLPLGSDSL EYAWLIDVQA GSLTAKVTAP QLACLLEWGQ TFVFHVVCRE
960 970 980 990 1000
YELERPKSVV ICQHGIDRRF CESKLSCIPG PCPTSDDLKY TMTRLAVDGA
1010 1020 1030 1040 1050
DIYIVEHGCA TNIKMGAVRV ANCNLHNQSV GEGVSAAVQD FEVRQYIEQL
1060 1070 1080 1090 1100
STCRTGLQPA VLRRAYWLEA GSANLGLITV DVALAADHHS KHEAQRHFLE
1110 1120 1130 1140 1150
THDARTKRLW FLWPDDTLKN KRCRNKCGCL GGCRFFGGTV TGLDFFKLEE
1160 1170 1180 1190 1200
LTPSSSSAFS STSAESDMYY GQSLLQPGEW IVTKEVPKTV DGNVNGMKRK
1210 1220 1230 1240 1250
EWENKSVGIE GERKTQHLSL QVPLRSHSSS SSSEENSSSS AAQPLLAGEK
1260 1270 1280 1290 1300
ESPSSVADGP AVQKEFLCGT KRDDGQASIP AEISGTSPVS PNTQDKSVGQ
1310 1320 1330 1340 1350
SPLRSPLKRQ ASVCSTRLGS TKSLTAAFYG DKQPVTVGVQ FSSDVSRSDE
1360 1370 1380 1390 1400
NVLDSPKQRR SFGSFPYTPS ADSNSFHQYR SMDSSMSMAD SEAYFSAAEE
1410 1420 1430 1440 1450
FEPISSDEGP GTYPGRKKKK KQMQQIDYSR GSIYHSVEGP LTVHGEGITD
1460 1470 1480 1490 1500
PRTLPFKTHP SQASFVSALG GEDEVIEHLY IVEGEKTGDT EQVTSQQPVM
1510 1520 1530 1540 1550
SCYQTYLTQF QVVNWSVKHP TNKRTSKSSL HRPLDLDTPT SEESSSSFEQ
1560 1570 1580 1590 1600
LCVPTFKVIK QGLTANSLLD RGMQLSGSTS NTPYTPLDKK IVDNTDDETL
1610 1620 1630 1640 1650
TEEWALDQPV AQTKTTAIVE VKGTVDVVLT PLVAEALDRY IEAMVHCAST
1660 1670 1680 1690 1700
RHPAAIVDDL HTKVLREAVQ NSKTTFSENL SPKQDIRGSK TEHPMIGTTN
1710 1720 1730 1740 1750
QGQTQTNATT KQDSVTIKGL QANVSIPKVN LCLLQASVEE SPATVPSRSV
1760 1770 1780 1790 1800
THVSLVALCF DRIATQVRMN RGVVEETANN VDSSKTSNFD RYVHASKMQP
1810 1820 1830 1840 1850
QSSGSLRSNA GAERGKEIAA KLNIHRVHGQ LRGLDTTDIG TCAITAIPFE
1860 1870 1880 1890 1900
KSKVLFTLEE LDEFTFVDET DQQAIPDVTR IGPSQEKWGW IMFECGLENL
1910 1920 1930 1940 1950
TIKGGRQSGA VLYNSFGIMG KTNVTERGGV LTSNNSSDSP TGSGYNTDVS
1960 1970 1980 1990 2000
DDNLPCDRTS PSSDINGNSV SDEQDEGVES DDLKKDLPLM PPPPDSCSMK
2010 2020 2030 2040 2050
LTIKEIWFSF AAPTNVRSPA HAFSRQLNLL STATPAVGSW LVPIDQLKSS
2060 2070 2080 2090 2100
LNKLDTEGTL RICAVMGCIM TEALENKSVH FPLRSKYNRL TKVARFLQEN
2110 2120 2130 2140 2150
PSCLLCNILH HYLHQANYSI IDDATMSDGL PALVTLKKGL VALARQWMKF
2160 2170 2180 2190 2200
IVVTPAFKGV SLHRPAQPLK PPAAVDHEHE EGLGLDNGGG LQSDTSADGA
2210 2220 2230 2240 2250
EFEFDAATVS EHTMLLEGTA NRPPPGGSGP VTGAEIMRKL SKTHTHSDSA
2260 2270 2280 2290 2300
LKIKGIHPYH SLSYTSGDTA TDSPVHVGRA GMPVKESPRK ESLLSYLTGS
2310 2320 2330 2340 2350
FPSLHNLLEG TPQRSSAAVK SSSLTRTGNT VATDMLSEHP LLSEPSSVSF
2360 2370 2380 2390 2400
YNWMSNAVGN RGSVVQESPV TKSGHNSLPT GVAPNLPTIP SASDFNTVLS
2410 2420 2430 2440 2450
SDQNTLDGTH SQHSTSQDDV AGVEEANQGF PAVQLADAQV VFKPLLSHTG
2460 2470 2480 2490 2500
IQSQDTMPLC YRMYFGEHLS FSGTLDCLRA DIVDSDTAKD RKGKRARRQG
2510 2520 2530 2540 2550
HVNLPPLEFK PALMLETFSI SAVVMEKSVC TPQNSTSALS FHDLNKRYYN
2560 2570 2580 2590 2600
TFHCNFTISC QSISQHVDMA LVRLIHQFST MIDDIKATQT DIKLSRYTAG
2610 2620 2630 2640 2650
SASPTPTFKT RKHRDFRSSD FSRSSRGSLN GGNRVNNAKN KRANSENNKK
2660 2670 2680 2690 2700
ESRNKNSLGR SERRTSKVSR KGSKDVVDHM TIHMDDSDSI TVSEQSEPSA
2710 2720 2730 2740 2750
ECWQNMYKLL NFYSLISDPT GILEKSSETF GPAGVRSPTE PTCRVVFENE
2760 2770 2780 2790 2800
QDSNSLTKTQ RKRSLVTAEP QHVTLIVFGI GMVNRTHLEA DIGGLTMESE
2810 2820 2830 2840 2850
LKRIHGSFTL KEKMKDVLHQ KMTETCATAH IGGVNIVLLE GITPNIQLED
2860 2870 2880 2890 2900
FPTSPTSTAK QEFLTVVKCS IAKSQALYSA QRGLKTNNAA VFKVGAISIN
2910 2920 2930 2940 2950
IPQHPATLHS MMVRSSHQLS KQISDLIRQP STAPQPVKED IATPLPSEKT
2960 2970 2980 2990 3000
PTSVNQTPIE TNEFPQLPEG LEKKPIVLKF SAMLDGIAIG AALLPSLKAE
3010 3020 3030 3040 3050
YKMGRMRSHG MTGAQTRFTF ELPNHRLRFT SKVSATDMST IPPSASLNLP
3060 3070 3080 3090 3100
PVTMSGKYIM EEHDSYSDQV WSIDELPSKQ GYYLQGNYLR CVAEVGSFEH
3110 3120 3130 3140 3150
NLTTDLLNHL VFVQKVFMKE VNEVIQKVSG GEQPIPLWNE HDGTTDGDKP
3160 3170 3180 3190 3200
KILLYSLNLQ FKGIQVTATT PSMRAVRFET GLIELELSNR LQTKASPGSS
3210 3220 3230 3240 3250
SYLKLFGKCQ VDLNLALGQI VKHQVYEEAG SDFHQVAYFK TRIGLRNALR
3260 3270 3280 3290 3300
EEISGSSDRE AVLITLNRPI VYAQPVAFDR AVLFWLNYKA AYDNWNEQRM
3310 3320 3330 3340 3350
ALHKDIHMAT KEVVDMLPGI QQTSAQAFGT LFLQLTVNDL GICLPITNTA
3360 3370 3380 3390 3400
QSNHTGDLDT GSALVLTIES TLITACSSES LVSKGHFKNF CIRFADGFET
3410 3420 3430 3440 3450
SWDDWKPEIR GDLVMNACVV PDGTYEVCSR TTGQAAAESS SAGTWTLNVL
3460 3470 3480 3490 3500
WKMCGIDVHM DPNIGKRLNA LGNTLTTLTG EEDIDDIADL NSVNIADLSD
3510 3520 3530 3540 3550
EDEVDTMSPT IHTEAVDYRR QGTSSSQPGE PRGRKIMKRL VDIRELNEQA
3560 3570 3580 3590 3600
KVIDDLKKLG ASEGTINQEI QRYQQLESVA VNDIRRDVRK KLRRSSMRAA
3610 3620 3630 3640 3650
SLKDKWGLGY KPSYSRSKSI SASGRPPLKR MERASSRIGE TDELPEIRVD
3660 3670 3680 3690 3700
AASPGPRVTF NIQDTFPEET ELDLLSVTIE GPSHYSSNSE GSCSVFSSPK
3710 3720 3730 3740 3750
TTGGFSPSVP FQSEDGRRDD SLSSTSEDSE KDEKDEDRER EKFYIYRKPS
3760 3770 3780 3790 3800
HTSRKKATGF AAVHQLLTER WPTTPVNRSL SGTATERNID FELDIRVEID
3810 3820 3830 3840 3850
SGKCVLHPTT LLQEHDDISL RRSYDRSSRS LDQDSPSKKK KFQTNYASTT
3860 3870 3880 3890 3900
HLMTGKKVPS SLQTKPSDLE TTVFYIPGVD VKLHYNSKTL KTESPNASRG
3910 3920 3930 3940 3950
SSLPRTLSKE SKLYGMKDNA ASPSSPPLPC TVQSKTNTLL PPQPPPIPSA
3960 3970 3980 3990 4000
KGKGSGGVKT AKLYAWVALQ SLPEEMVISP CLLDFLEKAL ETIPITPIER
4010 4020 4030 4040 4050
NYTAVSSQDE DMGHFDIPDP MEESTTSLVS SSTSAYSSFP VDVVVYVRVQ
4060 4070 4080 4090 4100
PSQIKFSCLP VSRVECMLKL PSLDLVFSSN RGELETLGTT YPAETLSPGS
4110 4120 4130 4140 4150
SAPQSGAKTS ASKAGMPGSS GLGSPLGRSR HSSSQSDLTG SSSSSSGLSF
4160 4170 4180 4190 4200
TACMSDFSLY VFHPYGAGKQ KSTVSGLTPG SGGLGNVDEE PTSVTGRKDS
4210 4220 4230 4240 4250
LSINLEFVKV SLSRIRRSGG ASFSESQSVS KSSSKMDTTL INISAVCDIG
4260 4270 4280 4290 4300
SASFKYDMRR LSEILAFPRA WYRRSIARRL FLGDQTVNLP TSGPGTPDSI
4310 4320 4330 4340 4350
EGVSQHLSPE SSRKAYCRTW DQPSQSASFT HMPQSPNVFS EHMTNNTMSP
4360 4370 4380 4390 4400
GTAAAQSLKS PASIRSRSVS DSSVPRRDSI SKTSTPVNKS NKAASQQGTP
4410 4420 4430 4440 4450
WETLVVFAIN LKQLNVQMNM SNVMGNTTWT TSGLKSQGRL SVGSNRDREI
4460 4470 4480 4490 4500
SMSVGLGRSQ LDSKGGVVGG TIDVNALEMV AHISEHPNQQ PNHKIQITMG
4510 4520 4530 4540 4550
STESRVDYMG SSILMGIFSN ADLKLQDEWK VNFYNALDSS MTDKSEIFVH
4560 4570 4580 4590 4600
GDLKWDIFQV MISRSTTPDL IKIGMKLQEF FTQQFDTSKR ALSTWGPVPY
4610 4620 4630 4640 4650
LPPKTVTNNL EKNSQEQLLD AAHHRHWPGV LKVVSGCHIS LFQVPLPEDG
4660 4670 4680 4690 4700
MQFGGSMSLH GNHMTLACFH GPNFRSKSWA LFHLEEPNIA FWTEAQKIWE
4710 4720 4730 4740 4750
DGSSDHSTYI VQTLDFHLGH NTMVTKPCGA LESPMATITK ITRRRHENPP
4760 4770 4780 4790 4800
HGVASVKEWF NYVTATRNEE LNLLRNVDAN NSENSTTVKN SSLLSGFRGG
4810 4820 4830 4840 4850
SSYNHETETI FALPRMQLEF KSIHVQEPQE PSLQDANVKP KVECSVVTEF
4860 4870 4880 4890 4900
TDHICVTMDA ELIMFLHDLV SAYLKEKEKA IFPPRILSTR PGQKCPVIIQ
4910 4920 4930 4940 4950
DDNSSDRDRE DGITYTTVDW RDFMCNTWHL EPTLRLISWT GRKIDPVGVD
4960 4970 4980 4990 5000
YILQKLGFHH ARTTIPKWLQ RGVMDPLDKV LSVLIKKLGT ALQDEKEKKG

KDKEEH
Length:5,006
Mass (Da):554,487
Last modified:November 26, 2014 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i4EF0CBCC6CAA1B31
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 5 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
F1LVK0F1LVK0_RAT
Similar to RIKEN cDNA D630029K19
RGD1307100
4,552Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
D4A1I0D4A1I0_RAT
Similar to RIKEN cDNA D630029K19
RGD1307100
218Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A0G2K1D4A0A0G2K1D4_RAT
Similar to RIKEN cDNA D630029K19
RGD1307100
130Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A0G2K439A0A0G2K439_RAT
Similar to RIKEN cDNA D630029K19
RGD1307100
36Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A0G2K2E6A0A0G2K2E6_RAT
Similar to RIKEN cDNA D630029K19
RGD1307100
75Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

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DDBJi
Links Updated
AABR07010103 Genomic DNA No translation available.
AABR07010104 Genomic DNA No translation available.
AABR07010105 Genomic DNA No translation available.
AABR07010106 Genomic DNA No translation available.
AABR07072725 Genomic DNA No translation available.

NCBI Reference Sequences

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RefSeqi
XP_017446236.1, XM_017590747.1

Genome annotation databases

Ensembl eukaryotic genome annotation project

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Ensembli
ENSRNOT00000075947; ENSRNOP00000068256; ENSRNOG00000038436

Database of genes from NCBI RefSeq genomes

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GeneIDi
294978

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07010103 Genomic DNA No translation available.
AABR07010104 Genomic DNA No translation available.
AABR07010105 Genomic DNA No translation available.
AABR07010106 Genomic DNA No translation available.
AABR07072725 Genomic DNA No translation available.
RefSeqiXP_017446236.1, XM_017590747.1

3D structure databases

Database of comparative protein structure models

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ModBasei
Search...

SWISS-MODEL Interactive Workspace

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SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000068256

Proteomic databases

jPOSTiA0A096MJT6
PaxDbiA0A096MJT6

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000075947; ENSRNOP00000068256; ENSRNOG00000038436
GeneIDi294978

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
294978
RGDi1307100 RGD1307100

Phylogenomic databases

eggNOGiKOG3596 Eukaryota
ENOG410XT7P LUCA
GeneTreeiENSGT00640000091487
OMAiVPTTCNT
OrthoDBi77777at2759

Gene expression databases

BgeeiENSRNOG00000038436 Expressed in 10 organ(s), highest expression level in brain
ExpressionAtlasiA0A096MJT6 baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR018863 Fragile_site-assoc_C
IPR033616 KIAA1109
PANTHERiPTHR31640 PTHR31640, 1 hit
PfamiView protein in Pfam
PF10479 FSA_C, 2 hits
SMARTiView protein in SMART
SM01220 FSA_C, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

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ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A096MJT6_RAT
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A096MJT6
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: November 26, 2014
Last sequence update: November 26, 2014
Last modified: June 5, 2019
This is version 30 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
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