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Protein
Submitted name:

Leucine-rich repeat transmembrane protein FLRT2

Gene

AS28_13613

Organism
Pygoscelis adeliae (Adelie penguin)
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Leucine-rich repeat transmembrane protein FLRT2Imported
Gene namesi
ORF Names:AS28_13613Imported
OrganismiPygoscelis adeliae (Adelie penguin)Imported
Taxonomic identifieri9238 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeSphenisciformesSpheniscidaePygoscelis
Proteomesi
  • UP000054081 Componenti: Unassembled WGS sequence

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei543 – 566HelicalSequence analysisAdd BLAST24

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 35Sequence analysisAdd BLAST35
ChainiPRO_500188547336 – 662Sequence analysisAdd BLAST627

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini35 – 67LRRNTInterPro annotationAdd BLAST33
Domaini310 – 361LRRCTInterPro annotationAdd BLAST52

Keywords - Domaini

Leucine-rich repeatSAAS annotation, RepeatSAAS annotation, SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Family and domain databases

Gene3Di3.80.10.10, 1 hit
InterProiView protein in InterPro
IPR000483 Cys-rich_flank_reg_C
IPR036116 FN3_sf
IPR001611 Leu-rich_rpt
IPR003591 Leu-rich_rpt_typical-subtyp
IPR032675 LRR_dom_sf
IPR000372 LRRNT
PfamiView protein in Pfam
PF13855 LRR_8, 2 hits
PF01463 LRRCT, 1 hit
SMARTiView protein in SMART
SM00369 LRR_TYP, 7 hits
SM00082 LRRCT, 1 hit
SM00013 LRRNT, 1 hit
SUPFAMiSSF49265 SSF49265, 1 hit
PROSITEiView protein in PROSITE
PS51450 LRR, 7 hits

Sequencei

Sequence statusi: Complete.

A0A093NGC7-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGSWTRMWPT DWAVLMKSWL IFSLGLYMQV SKSLACPKVC RCDRNFVYCN
60 70 80 90 100
ERSLTSVPLG IPEGVTVLYL HNNQINNAGF PAELHNVQSV HTVYLYGNQL
110 120 130 140 150
DEFPMNLPKN VRVLHLQENN IQTISRAALA QLLKLEELHL DDNSISTVGV
160 170 180 190 200
EDGAFREAIS LKLLFLSKNH LSSVPVGLPV DLQELRVDEN RIAVISDLAF
210 220 230 240 250
QNLTSLERLI VDGNLLTNKG IAEGTFSHLS KLKEFSIVRN SLTYPPPDLP
260 270 280 290 300
GTHLLRLYLQ DNQITHIPLT AFSNLYKLER LDISNNQLRM LVKGVFDNLH
310 320 330 340 350
NLRQLTVRNN PWLCDCSIKW VTEWLKFIPA SINVRGFMCQ GPEQVRGMAV
360 370 380 390 400
RELNMNMLSC PTSTPGLPLI ITPLPATAMP TTLVSTSSVP PPSSKYNPLT
410 420 430 440 450
PTIATLPTVP DREDRERVTP PISERIQLSI HFVNDTCIQV NWMSLFTVMA
460 470 480 490 500
YKLTWVKMGH SLVGGIVQER IVSGEKQHLS LVNLEPKSTY RICLVPLDTY
510 520 530 540 550
NNYRTGEDTV CSEATTKASF LSNGSNIPSS HEQTTSQNLG SPFLLAGLIG
560 570 580 590 600
GAVIFVLVVL LSIFCWHMHK KGRYTSQKWK YNRGRRKDDY CEAGTKKDNS
610 620 630 640 650
ILEMTETSFQ IVSLNNDQLL KGDFRLQPIY TPNGGINYTD CHIPNNMRYC
660
NSNVSDLEHC HT
Length:662
Mass (Da):74,585
Last modified:November 26, 2014 - v1
Checksum:i08F6D4FF252013E5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KL224798 Genomic DNA Translation: KFW63938.1
RefSeqiXP_009317704.1, XM_009319429.1

Genome annotation databases

GeneIDi103912986

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KL224798 Genomic DNA Translation: KFW63938.1
RefSeqiXP_009317704.1, XM_009319429.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi103912986

Organism-specific databases

CTDi23768

Family and domain databases

Gene3Di3.80.10.10, 1 hit
InterProiView protein in InterPro
IPR000483 Cys-rich_flank_reg_C
IPR036116 FN3_sf
IPR001611 Leu-rich_rpt
IPR003591 Leu-rich_rpt_typical-subtyp
IPR032675 LRR_dom_sf
IPR000372 LRRNT
PfamiView protein in Pfam
PF13855 LRR_8, 2 hits
PF01463 LRRCT, 1 hit
SMARTiView protein in SMART
SM00369 LRR_TYP, 7 hits
SM00082 LRRCT, 1 hit
SM00013 LRRNT, 1 hit
SUPFAMiSSF49265 SSF49265, 1 hit
PROSITEiView protein in PROSITE
PS51450 LRR, 7 hits
ProtoNetiSearch...

Entry informationi

Entry nameiA0A093NGC7_PYGAD
AccessioniPrimary (citable) accession number: A0A093NGC7
Entry historyiIntegrated into UniProtKB/TrEMBL: November 26, 2014
Last sequence update: November 26, 2014
Last modified: February 28, 2018
This is version 21 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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