Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

5-hydroxytryptamine receptor 2C

Gene

N307_00561

Organism
Dryobates pubescens (Downy woodpecker) (Picoides pubescens)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionG-protein coupled receptorUniRule annotationSAAS annotation, Receptor, Transducer

Names & Taxonomyi

Protein namesi
Submitted name:
5-hydroxytryptamine receptor 2CImported
Gene namesi
ORF Names:N307_00561Imported
OrganismiDryobates pubescens (Downy woodpecker) (Picoides pubescens)Imported
Taxonomic identifieri118200 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaePiciformesPicidaePicoides
Proteomesi
  • UP000053875 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei39 – 62HelicalSequence analysisAdd BLAST24
Transmembranei74 – 100HelicalSequence analysisAdd BLAST27
Transmembranei112 – 134HelicalSequence analysisAdd BLAST23
Transmembranei155 – 177HelicalSequence analysisAdd BLAST23
Transmembranei197 – 219HelicalSequence analysisAdd BLAST23
Transmembranei296 – 316HelicalSequence analysisAdd BLAST21
Transmembranei336 – 355HelicalSequence analysisAdd BLAST20

Keywords - Cellular componenti

Cell membraneSAAS annotation, Membrane

PTM / Processingi

Keywords - PTMi

Disulfide bondSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini54 – 352G_PROTEIN_RECEP_F1_2InterPro annotationAdd BLAST299

Sequence similaritiesi

Belongs to the G-protein coupled receptor 1 family.UniRule annotationSAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Family and domain databases

InterProiView protein in InterPro
IPR000377 5HT2C_rcpt
IPR002231 5HT_rcpt
IPR000276 GPCR_Rhodpsn
IPR017452 GPCR_Rhodpsn_7TM
PANTHERiPTHR24247:SF32 PTHR24247:SF32, 1 hit
PfamiView protein in Pfam
PF00001 7tm_1, 1 hit
PRINTSiPR01101 5HTRECEPTOR
PR00237 GPCRRHODOPSN
SMARTiView protein in SMART
SM01381 7TM_GPCR_Srsx, 1 hit
PROSITEiView protein in PROSITE
PS00237 G_PROTEIN_RECEP_F1_1, 1 hit
PS50262 G_PROTEIN_RECEP_F1_2, 1 hit

Sequencei

Sequence statusi: Fragment.

A0A093GSA2-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAWAFSSNLT LNQSLPTADP LNASGRDELS RLAVRGKNWP ALLILVVILL
60 70 80 90 100
TIGGNILVIM AVSLEKKLQN ATNFFLMSLA VADMLVGILV MPVSLITVLY
110 120 130 140 150
DYAWPLPNQL CPIWISLDVL FSTASIMHLC AISLDRYVAI RNPIEHSRFN
160 170 180 190 200
SRTKAILKIA AVWTISIGIS MPIPVIGLQD DSRVFVNGTC VLNDENFVLI
210 220 230 240 250
GSFMAFFIPL IIMVITYCLT VQVLQRQASV FLCGEVSKQR RSSVNCLKKE
260 270 280 290 300
NNPEHVSMLQ NHEGASHLNS PASREAVLFR KGTMQSINNE RRASKVLGIV
310 320 330 340 350
FFLFLVMWCP FFITNVMSVL CKEACDRDLL GELLDVFVWV GYVCSGVNPL
360
VYTLFNKTYR RAFSSYI
Length:367
Mass (Da):41,009
Last modified:November 26, 2014 - v1
Checksum:i71FBE913CF80A600
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei367Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KL216507 Genomic DNA Translation: KFV69892.1
RefSeqiXP_009902159.1, XM_009903857.1

Genome annotation databases

GeneIDi104303255

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KL216507 Genomic DNA Translation: KFV69892.1
RefSeqiXP_009902159.1, XM_009903857.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

GPCRDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi104303255

Organism-specific databases

CTDi3358

Family and domain databases

InterProiView protein in InterPro
IPR000377 5HT2C_rcpt
IPR002231 5HT_rcpt
IPR000276 GPCR_Rhodpsn
IPR017452 GPCR_Rhodpsn_7TM
PANTHERiPTHR24247:SF32 PTHR24247:SF32, 1 hit
PfamiView protein in Pfam
PF00001 7tm_1, 1 hit
PRINTSiPR01101 5HTRECEPTOR
PR00237 GPCRRHODOPSN
SMARTiView protein in SMART
SM01381 7TM_GPCR_Srsx, 1 hit
PROSITEiView protein in PROSITE
PS00237 G_PROTEIN_RECEP_F1_1, 1 hit
PS50262 G_PROTEIN_RECEP_F1_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A093GSA2_DRYPU
AccessioniPrimary (citable) accession number: A0A093GSA2
Entry historyiIntegrated into UniProtKB/TrEMBL: November 26, 2014
Last sequence update: November 26, 2014
Last modified: November 7, 2018
This is version 18 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again