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Protein
Submitted name:

RNA-binding protein 45

Gene

N335_00756

Organism
Phaethon lepturus (White-tailed tropicbird)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
RNA-binding protein 45Imported
Gene namesi
ORF Names:N335_00756Imported
OrganismiPhaethon lepturus (White-tailed tropicbird)Imported
Taxonomic identifieri97097 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaePelecaniformesPhaethontidaePhaethon
Proteomesi
  • UP000053638 Componenti: Unassembled WGS sequence

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini21 – 95RRMInterPro annotationAdd BLAST75
Domaini291 – 363RRMInterPro annotationAdd BLAST73

Phylogenomic databases

PhylomeDBiA0A091THI4

Family and domain databases

CDDicd12367 RRM2_RBM45, 1 hit
cd12368 RRM3_RBM45, 1 hit
cd12369 RRM4_RBM45, 1 hit
Gene3Di3.30.70.330, 3 hits
InterProiView protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR034206 RBM45_RRM2
IPR034207 RBM45_RRM3
IPR034208 RBM45_RRM4
IPR000504 RRM_dom
PfamiView protein in Pfam
PF00076 RRM_1, 3 hits
SMARTiView protein in SMART
SM00360 RRM, 3 hits
SUPFAMiSSF54928 SSF54928, 3 hits
PROSITEiView protein in PROSITE
PS50102 RRM, 2 hits

Sequencei

Sequence statusi: Fragment.

A0A091THI4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
VFIAQSRASG SHRDVEDEEL TRIFVMIPKS YTEEDLREKF KIYGDIEYCS
60 70 80 90 100
IIKNKTTGES KGLGYVRYLK PSQAARAIEE CDRSYRAILA EPKNKSSESF
110 120 130 140 150
EHDYYSNNTR QEPRGNTLLF CGQPEFCSFE KHESRIQESV SKRLSVVSRL
160 170 180 190 200
PFIQEQLFAL FDLIPGLEYC DVQRDPHTNS GYAVIQYSTA ASAIYAKYKL
210 220 230 240 250
HGFEYPPGNR LTVIFLEDGS DSSDLIRKMA TQLVTAHVSS VLRNNNAIVQ
260 270 280 290 300
QYRTPPQAFG GTSGSQLLQP QTDAILPPHK KKVPPDTSVK ERLFILFHPH
310 320 330 340 350
PLPVNVLEDV FCRFGHLIKV YLVAGKNVGY AKFADRASAS DAITALHGKI
360 370
VNGVRLKVRL ADSPTEESNK RQRTY
Length:375
Mass (Da):42,377
Last modified:November 26, 2014 - v1
Checksum:i1C95FB5A747736E6
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1
Non-terminal residuei375Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KK453595 Genomic DNA Translation: KFQ75024.1
RefSeqiXP_010285456.1, XM_010287154.1

Genome annotation databases

GeneIDi104620829

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KK453595 Genomic DNA Translation: KFQ75024.1
RefSeqiXP_010285456.1, XM_010287154.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi104620829

Organism-specific databases

CTDi129831

Phylogenomic databases

PhylomeDBiA0A091THI4

Family and domain databases

CDDicd12367 RRM2_RBM45, 1 hit
cd12368 RRM3_RBM45, 1 hit
cd12369 RRM4_RBM45, 1 hit
Gene3Di3.30.70.330, 3 hits
InterProiView protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR034206 RBM45_RRM2
IPR034207 RBM45_RRM3
IPR034208 RBM45_RRM4
IPR000504 RRM_dom
PfamiView protein in Pfam
PF00076 RRM_1, 3 hits
SMARTiView protein in SMART
SM00360 RRM, 3 hits
SUPFAMiSSF54928 SSF54928, 3 hits
PROSITEiView protein in PROSITE
PS50102 RRM, 2 hits
ProtoNetiSearch...

Entry informationi

Entry nameiA0A091THI4_PHALP
AccessioniPrimary (citable) accession number: A0A091THI4
Entry historyiIntegrated into UniProtKB/TrEMBL: November 26, 2014
Last sequence update: November 26, 2014
Last modified: February 28, 2018
This is version 17 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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