Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Dorsal root ganglia homeobox protein

Gene

N330_02496

Organism
Leptosomus discolor (Madagascar cuckoo roller) (Cuculus discolor)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi22 – 81HomeoboxPROSITE-ProRule annotationAdd BLAST60

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDevelopmental proteinPROSITE-ProRule annotation, DNA-bindingPROSITE-ProRule annotationSAAS annotationImported

Names & Taxonomyi

Protein namesi
Submitted name:
Dorsal root ganglia homeobox proteinImported
Gene namesi
ORF Names:N330_02496Imported
OrganismiLeptosomus discolor (Madagascar cuckoo roller) (Cuculus discolor)Imported
Taxonomic identifieri188344 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeCoraciiformesLeptosomidaeLeptosomus
Proteomesi
  • UP000053001 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini20 – 80HomeoboxInterPro annotationAdd BLAST61
Domaini191 – 204OARInterPro annotationAdd BLAST14

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi191 – 204OARPROSITE-ProRule annotationAdd BLAST14

Sequence similaritiesi

Belongs to the paired homeobox family.SAAS annotation

Keywords - Domaini

HomeoboxPROSITE-ProRule annotationSAAS annotationImported

Phylogenomic databases

PhylomeDBiA0A091R3B7

Family and domain databases

CDDicd00086 homeodomain, 1 hit
InterProiView protein in InterPro
IPR009057 Homeobox-like_sf
IPR017970 Homeobox_CS
IPR001356 Homeobox_dom
IPR003654 OAR_dom
PfamiView protein in Pfam
PF00046 Homeobox, 1 hit
PF03826 OAR, 1 hit
SMARTiView protein in SMART
SM00389 HOX, 1 hit
SUPFAMiSSF46689 SSF46689, 1 hit
PROSITEiView protein in PROSITE
PS00027 HOMEOBOX_1, 1 hit
PS50071 HOMEOBOX_2, 1 hit
PS50803 OAR, 1 hit

Sequencei

Sequence statusi: Fragment.

A0A091R3B7-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
GAAPFGGHSA GDFDDGFLRR KQRRNRTTFT LQQLEALEAV FAQTHYPDVF
60 70 80 90 100
TREELAMKIN LTEARVQVWF QNRRAKWRKT ERGAPDQEGS KETMAEVAAP
110 120 130 140 150
ARNLNSPSPA EQTRNKKEGL EIQQSLSRAV GPTGPFFPSC LPGTLLNTAT
160 170 180 190 200
YAQALSHVAS LKGSPLCSCC VPDPMGLSFL PTYGCQSNRT ASVAALRMKA
210 220 230 240 250
REHSEAVLQS ANLLPTTSNS PTPPTKPSPE GSQDKQPSPA KEHMEGEKNL
Length:250
Mass (Da):27,263
Last modified:November 26, 2014 - v1
Checksum:iBC8B8BCA9DE36509
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1
Non-terminal residuei250Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KK689641 Genomic DNA Translation: KFQ16044.1
RefSeqiXP_009957322.1, XM_009959020.1

Genome annotation databases

GeneIDi104352634

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KK689641 Genomic DNA Translation: KFQ16044.1
RefSeqiXP_009957322.1, XM_009959020.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi104352634

Organism-specific databases

CTDi644168

Phylogenomic databases

PhylomeDBiA0A091R3B7

Family and domain databases

CDDicd00086 homeodomain, 1 hit
InterProiView protein in InterPro
IPR009057 Homeobox-like_sf
IPR017970 Homeobox_CS
IPR001356 Homeobox_dom
IPR003654 OAR_dom
PfamiView protein in Pfam
PF00046 Homeobox, 1 hit
PF03826 OAR, 1 hit
SMARTiView protein in SMART
SM00389 HOX, 1 hit
SUPFAMiSSF46689 SSF46689, 1 hit
PROSITEiView protein in PROSITE
PS00027 HOMEOBOX_1, 1 hit
PS50071 HOMEOBOX_2, 1 hit
PS50803 OAR, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A091R3B7_LEPDC
AccessioniPrimary (citable) accession number: A0A091R3B7
Entry historyiIntegrated into UniProtKB/TrEMBL: November 26, 2014
Last sequence update: November 26, 2014
Last modified: October 10, 2018
This is version 25 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again