Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Cadherin-4

Gene

N330_01829

Organism
Leptosomus discolor (Madagascar cuckoo roller) (Cuculus discolor)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Cadherins are calcium-dependent cell adhesion proteins.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processCell adhesionUniRule annotationSAAS annotation
LigandCalciumUniRule annotationSAAS annotation, Metal-bindingSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Cadherin-4Imported
Gene namesi
ORF Names:N330_01829Imported
OrganismiLeptosomus discolor (Madagascar cuckoo roller) (Cuculus discolor)Imported
Taxonomic identifieri188344 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeCoraciiformesLeptosomidaeLeptosomus
Proteomesi
  • UP000053001 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei530 – 563HelicalSequence analysisAdd BLAST34

Keywords - Cellular componenti

Cell membraneSAAS annotation, Membrane

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 83CAInterPro annotationAdd BLAST83
Domaini107 – 198CAInterPro annotationAdd BLAST92
Domaini221 – 314CAInterPro annotationAdd BLAST94
Domaini337 – 421CAInterPro annotationAdd BLAST85
Domaini441 – 526CAInterPro annotationAdd BLAST86

Keywords - Domaini

RepeatSAAS annotation, Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

PhylomeDBiA0A091Q7A7

Family and domain databases

Gene3Di4.10.900.10, 1 hit
InterProiView protein in InterPro
IPR039808 Cadherin
IPR002126 Cadherin-like_dom
IPR015919 Cadherin-like_sf
IPR020894 Cadherin_CS
IPR000233 Cadherin_cytoplasmic-dom
IPR027397 Catenin_binding_dom_sf
PANTHERiPTHR24027 PTHR24027, 1 hit
PfamiView protein in Pfam
PF00028 Cadherin, 5 hits
PF01049 Cadherin_C, 1 hit
PRINTSiPR00205 CADHERIN
SMARTiView protein in SMART
SM00112 CA, 5 hits
SUPFAMiSSF49313 SSF49313, 5 hits
PROSITEiView protein in PROSITE
PS00232 CADHERIN_1, 2 hits

Sequencei

Sequence statusi: Fragment.

A0A091Q7A7-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
IRSDKDKEIH IRYSITGVGA DQPPMEVFSI DPVSGRMYVT RPMDREERAS
60 70 80 90 100
YHLRAHAVDM NGNKVENPID LYIYVIDMND NRPEFINQVY NGSVDEGSKP
110 120 130 140 150
GTYVMTVTAN DADDSTTANG MVRYRIVTQT PQSPSQNMFT INSETGDIVT
160 170 180 190 200
VAAGLDREKV QQYIVIVQAT DMEGNLNYGL SNTATAIITV TDVNDNPPEF
210 220 230 240 250
TTSTYSGEVP ENRVEVVVAN LTVMDRDQPH SPNWNAIYRI ISGDPSGHFT
260 270 280 290 300
IRTDPVTNEG MVTVVKAVDY EMNRAFMLTV MVSNQAPLAS GIQMSFQSTA
310 320 330 340 350
GVTISVTDVN EAPYFPTNHK LIRLEEGVPT GTVLTTFSAV DPDRFMQQAV
360 370 380 390 400
RYSKLSDPAN WLNINATNGQ ITTAAVLDRE SDYIKNNVYE ATFLAADNGI
410 420 430 440 450
PPASGTGTLQ IYLIDINDNA PELLPKEAQI CEKPNLNVIN ITAADADIDP
460 470 480 490 500
NVGPFVFELP SVPSAVRKNW TITRLNGDYA QLSLRIMYLE AGVYDVPIIV
510 520 530 540 550
TDSGNPPLYN TSVIKVKVCP CDENGDCTTI GAVAAAGLGT GAIIAILICI
560 570 580 590 600
IILLTMVLLF VVWMKRREKE RHTKQLLIDP EDDVRDNILK YDEEGGGEED
610 620 630 640 650
QDYDLSQLQQ PETMDHVLNK TPGVRRGDER PIGADPQYPI RPVIPHPGDI
660 670 680 690 700
GDFINEGLRA ADNDPTAPPY DSLLVFDYEG SGSTAGSVSS LNSSSSGDQD
710 720
YDYLNDWGPR FKKLADMYGG GEED
Length:724
Mass (Da):79,514
Last modified:November 26, 2014 - v1
Checksum:i5A0981CF0298B252
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1
Non-terminal residuei724Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KK689009 Genomic DNA Translation: KFQ15825.1
RefSeqiXP_009956888.1, XM_009958586.1

Genome annotation databases

GeneIDi104352292

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KK689009 Genomic DNA Translation: KFQ15825.1
RefSeqiXP_009956888.1, XM_009958586.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi104352292

Organism-specific databases

CTDi1002

Phylogenomic databases

PhylomeDBiA0A091Q7A7

Family and domain databases

Gene3Di4.10.900.10, 1 hit
InterProiView protein in InterPro
IPR039808 Cadherin
IPR002126 Cadherin-like_dom
IPR015919 Cadherin-like_sf
IPR020894 Cadherin_CS
IPR000233 Cadherin_cytoplasmic-dom
IPR027397 Catenin_binding_dom_sf
PANTHERiPTHR24027 PTHR24027, 1 hit
PfamiView protein in Pfam
PF00028 Cadherin, 5 hits
PF01049 Cadherin_C, 1 hit
PRINTSiPR00205 CADHERIN
SMARTiView protein in SMART
SM00112 CA, 5 hits
SUPFAMiSSF49313 SSF49313, 5 hits
PROSITEiView protein in PROSITE
PS00232 CADHERIN_1, 2 hits
ProtoNetiSearch...

Entry informationi

Entry nameiA0A091Q7A7_LEPDC
AccessioniPrimary (citable) accession number: A0A091Q7A7
Entry historyiIntegrated into UniProtKB/TrEMBL: November 26, 2014
Last sequence update: November 26, 2014
Last modified: November 7, 2018
This is version 21 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again