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Entry version 12 (16 Oct 2019)
Sequence version 1 (26 Nov 2014)
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Protein
Submitted name:

Zinc finger MYM-type protein 4

Gene

N300_15466

Organism
Calypte anna (Anna's hummingbird) (Archilochus anna)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Zinc finger MYM-type protein 4Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:N300_15466Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiCalypte anna (Anna's hummingbird) (Archilochus anna)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri9244 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeCaprimulgimorphaeApodiformesTrochilidaeCalypte
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000054308 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Unassembled WGS sequence

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini331 – 367TRASHInterPro annotationAdd BLAST37
Domaini378 – 418TRASHInterPro annotationAdd BLAST41
Domaini430 – 468TRASHInterPro annotationAdd BLAST39
Domaini475 – 514TRASHInterPro annotationAdd BLAST40
Domaini520 – 558TRASHInterPro annotationAdd BLAST39
Domaini568 – 604TRASHInterPro annotationAdd BLAST37
Domaini676 – 712TRASHInterPro annotationAdd BLAST37
Domaini718 – 753TRASHInterPro annotationAdd BLAST36
Domaini761 – 799TRASHInterPro annotationAdd BLAST39
Domaini805 – 840TRASHInterPro annotationAdd BLAST36

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni66 – 92DisorderedSequence analysisAdd BLAST27
Regioni151 – 177DisorderedSequence analysisAdd BLAST27
Regioni261 – 282DisorderedSequence analysisAdd BLAST22
Regioni848 – 867DisorderedSequence analysisAdd BLAST20
Regioni1129 – 1173DisorderedSequence analysisAdd BLAST45

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi848 – 866PolarSequence analysisAdd BLAST19
Compositional biasi1146 – 1167BasicSequence analysisAdd BLAST22

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR021893 DUF3504
IPR011017 TRASH_dom
IPR010507 Znf_MYM

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF12012 DUF3504, 1 hit
PF06467 zf-FCS, 5 hits

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00746 TRASH, 10 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Fragment.

A0A091HV03-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
QFEDKSDAVF DITEKCGEIL DAEMSEDTDH NLTPTLDGLS YGIQNQTGSE
60 70 80 90 100
NSLLDDDEED YFLNSGDLAG IPVVGSDNED DQNFTPKDTL PSAIHDEDHL
110 120 130 140 150
EEGKRVTEHE VDSEKEIQIQ NAVQKNLTSP FEQGPVFKSI RKDFSITRDN
160 170 180 190 200
GKETFSAKDK NREGHFQERE KRLEKIPKDM DSRLKSSFLD KAVHNQVEET
210 220 230 240 250
LRTQLAPQTP ETNFRESSYL FSSKESIGQE LGNSFAPSIR IKEEPLDDEY
260 270 280 290 300
DKAMAPQQGL LDKIKDEPDN SEEYGQQPKS QEGELKISAV FSVSGSPLAP
310 320 330 340 350
QLSSGFQPAV ASSGMSKMLP SVPTTAVRVS CSGCKKILQK GQTAYQRKGS
360 370 380 390 400
TQLFCSTLCL TGYTVPASRP PASTKKTCSS CSKDILNPKD VITAQFDNTN
410 420 430 440 450
SSKDFCSQSC LSTYEQKRKP VVTIHTNSIS TKCSMCQKNA VIRHEVNYQN
460 470 480 490 500
VVHKLCSDAC FSKFRSANNL TMNCCENCGG YCYSGSGQCH TLQIEGHSKK
510 520 530 540 550
FCNAACVTAY KQKSAKITPC TLCKSLRSSA EMIESTNNLG KAELFCSVNC
560 570 580 590 600
LSAYRVKMVT SAGVQVQCNS CKTSANPQYH LAMSDGSIRN FCSYSCVVAF
610 620 630 640 650
QNLFNKPAGT NSSVVPLSQG QVIVSIPAGA AVSAGGTTST VSPSSVSSSS
660 670 680 690 700
AAAGLQRLAA QSQQVTFARP VIKLRCQHCN RLFATKPELL DYKGKMFQFC
710 720 730 740 750
GKTCCDEYKK RSSVVAMCEY CKVEKIIKET VRFSGMDKSF CSEGCKLLYK
760 770 780 790 800
HDLAKRWGSH CKMCSYCLQV APKLVQNHFG GKMEEFCSEE CMSKFTVLFY
810 820 830 840 850
QMAKCDGCKR QGKLSESMKW HGEIKHFCNL LCILYFCNQQ ISDPPPQNNT
860 870 880 890 900
ANLSMAPASS SGPPLRKDST PVIANVVSLA STPAAQPTVN SNNVLQGAVP
910 920 930 940 950
TVTAKIIGDA STQTDALKLP PSQPPRLLKN KALLCKPITQ TKATSCKPHT
960 970 980 990 1000
QNKECQTEEE EEVQPRIIVV PVPVPVFVPV PLHLYTQYTP VPLGMPVPVP
1010 1020 1030 1040 1050
VPMLFPTTLD NADKIIETIQ DIKERIPTNP FEADLLQMAE MIAEDDEKEK
1060 1070 1080 1090 1100
PHSHGGSQTS EHELFLDPKI FEKDQGSTYS GDLESEAVST PHSWEEELNH
1110 1120 1130 1140 1150
YALRSTALPE PDAELKQFSK GDVEQDLEAD FPSDSFDPLS KGLGLHSRSR
1160 1170 1180 1190 1200
ARRRHRDGFP QPKRRGRKKS VVSVEPRNLM QGSYPGCSVS GMTLKYMYGV
1210 1220 1230 1240 1250
NAWKNWVQWK NAQEEQGDIK FSGSFFFLSG DRNTQLKSTW FRPVKLKEDI
1260 1270 1280 1290 1300
LSCTFAELSF GLCQFIQEVR RPNGEKYDPD SILYLCLGIQ QYLFENGRID
1310 1320 1330 1340 1350
NIFTEPYSRF MIELTKLLKI WEPTILPNGY MFSRIEEEHL WECKQLGAYS
1360 1370 1380 1390 1400
PIVLLNTLLF FNTKYFQLKN VSEHLKLSFA HVIRRTRILK YNTKMTYLRF
1410 1420 1430 1440 1450
FPPFQKQEVE SDKLSVGKRK RSEDEEVSTA VEMAENTDNP LRCPVRLYEF
1460 1470 1480 1490 1500
YLSKCSESVK QRSDVFYLQP ERSCVPNSPM WYSTLPIDPG TLDIMLTRIL
1510 1520
MVREVHEELA KVKSEDSDIE LSD
Length:1,523
Mass (Da):170,389
Last modified:November 26, 2014 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i6AB44AC023E23530
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section is used for sequence fragments to indicate that the residue at the extremity of the sequence is not the actual terminal residue in the complete protein sequence.<p><a href='/help/non_ter' target='_top'>More...</a></p>Non-terminal residuei1Imported1
Non-terminal residuei1523Imported1

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
KL217903 Genomic DNA Translation: KFP00149.1

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KL217903 Genomic DNA Translation: KFP00149.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Family and domain databases

InterProiView protein in InterPro
IPR021893 DUF3504
IPR011017 TRASH_dom
IPR010507 Znf_MYM
PfamiView protein in Pfam
PF12012 DUF3504, 1 hit
PF06467 zf-FCS, 5 hits
SMARTiView protein in SMART
SM00746 TRASH, 10 hits

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A091HV03_CALAN
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A091HV03
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: November 26, 2014
Last sequence update: November 26, 2014
Last modified: October 16, 2019
This is version 12 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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