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Protein
Submitted name:

Transcription factor RFX3

Gene

N320_00230

Organism
Buceros rhinoceros silvestris
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Transcription factor RFX3Imported
Gene namesi
ORF Names:N320_00230Imported
OrganismiBuceros rhinoceros silvestrisImported
Taxonomic identifieri175836 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeBucerotiformesBucerotidaeBuceros
Proteomesi
  • UP000054064 Componenti: Unassembled WGS sequence

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 75RFX-type winged-helixInterPro annotationAdd BLAST75

Family and domain databases

Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR003150 DNA-bd_RFX
IPR039779 RFX-like
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PANTHERiPTHR12619 PTHR12619, 1 hit
PfamiView protein in Pfam
PF02257 RFX_DNA_binding, 1 hit
SUPFAMiSSF46785 SSF46785, 1 hit
PROSITEiView protein in PROSITE
PS51526 RFX_DBD, 1 hit

Sequencei

Sequence statusi: Fragment.

A0A091HBD1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
LQWLLDNYET AEGVSLPRST LYNHYLRHCQ EHKLDPVNAA SFGKLIRSIF
60 70 80 90 100
MGLRTRRLGT RGNSKYHYYG IRVKPDSPLN RLQEDMQYMA MRQQPMQQKQ
110 120 130 140 150
RYKPMQKVDG VADGFTGSSQ QTGASVEQTV IAQSQHHQQF LDASRVLPEF
160 170 180 190 200
GEVEISSLPD GTTFEDIKSL QSLYREHCEA ILDVVVNLQF SLIEKLWQTF
210 220 230 240 250
WRYSPSAPPD GTTITEPSNL SEIESRLPKA KLITLCKNES ILKWMCNCDH
260 270 280 290 300
VMYQALVEIL IPDVLRPIPS ALTQAIRNFA KSLEGWLSNA MNNIPQRMIQ
310 320 330 340 350
TKVAAVSAFA QTLRRYTSLN HLAQAARAVL QNTSQINQML SDLNRVDFAN
360 370 380 390 400
VQEQASWVCQ CDDNMVQRLE TDFKMTLQQQ STLEQWAAWL DNVMMQALKP
410 420 430 440 450
YEGRPSFPKA ARQFLLKWSF YSSMVIRDLT LRSAASFGSF HLIRLLYDEY
460 470 480 490 500
MFYLVEHRVA QATGETPIAV MGEFGDLNAV SPGNMDKDEG SEVESEIDEE
510 520 530 540 550
LDENGEPSTK REKTELNQAF QVGCMQPVLE SGVQQNLLNP IHNEHIVATT
560
QTIRQCSATG NTYTAV
Length:566
Mass (Da):64,386
Last modified:November 26, 2014 - v1
Checksum:i9C7C70E63573B60B
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1
Non-terminal residuei566Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KL531013 Genomic DNA Translation: KFO92774.1
RefSeqiXP_010139341.1, XM_010141039.1

Genome annotation databases

GeneIDi104497759

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KL531013 Genomic DNA Translation: KFO92774.1
RefSeqiXP_010139341.1, XM_010141039.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi104497759

Organism-specific databases

CTDi5991

Family and domain databases

Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR003150 DNA-bd_RFX
IPR039779 RFX-like
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PANTHERiPTHR12619 PTHR12619, 1 hit
PfamiView protein in Pfam
PF02257 RFX_DNA_binding, 1 hit
SUPFAMiSSF46785 SSF46785, 1 hit
PROSITEiView protein in PROSITE
PS51526 RFX_DBD, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A091HBD1_BUCRH
AccessioniPrimary (citable) accession number: A0A091HBD1
Entry historyiIntegrated into UniProtKB/TrEMBL: November 26, 2014
Last sequence update: November 26, 2014
Last modified: November 7, 2018
This is version 13 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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