UniProtKB - A0A088MLT8 (IQIP1_MOUSE)
IQCJ-SCHIP1 readthrough transcript protein
Iqcj-Schip1
Functioni
GO - Molecular functioni
- ankyrin binding Source: UniProtKB
- calmodulin binding Source: UniProtKB
- ion channel binding Source: UniProtKB
GO - Biological processi
- axon ensheathment Source: UniProtKB
- negative regulation of cytoskeleton organization Source: UniProtKB
- positive regulation of hippo signaling Source: GO_Central
Names & Taxonomyi
Protein namesi | Recommended name: IQCJ-SCHIP1 readthrough transcript proteinCurated |
Gene namesi | Name:Iqcj-Schip1By similarity Synonyms:IqschfpImported, Schip1Imported |
Organismi | Mus musculus (Mouse)Imported |
Taxonomic identifieri | 10090 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Myomorpha › Muroidea › Muridae › Murinae › Mus › Mus |
Proteomesi |
|
Organism-specific databases
MGIi | MGI:5439400, Iqschfp |
Subcellular locationi
Plasma Membrane
- plasma membrane Source: GO_Central
Other locations
- axon initial segment Source: UniProtKB
- cell junction Source: GO_Central
- cytoplasm Source: UniProtKB-SubCell
- node of Ranvier Source: UniProtKB
Keywords - Cellular componenti
Cell projection, CytoplasmPathology & Biotechi
Disruption phenotypei
Mutagenesis
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Mutagenesisi | 53 – 54 | IQ → AA: Loss of interaction with calmodulin. 1 Publication | 2 |
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000442333 | 1 – 559 | IQCJ-SCHIP1 readthrough transcript proteinAdd BLAST | 559 |
Interactioni
Subunit structurei
Homooligomer (via coiled coil domain) (PubMed:27979964).
Interacts (via IQ domain) with calmodulin; the interaction is direct and lost in presence of calcium (PubMed:18550753).
Interacts with ANK3 (via ANK repeats); required for its localization at axon initial segments (AIS) and nodes of Ranvier (PubMed:18550753).
Interacts with SPTBN4 (PubMed:27979964).
Interacts with KCNQ2 and KCNQ3 (PubMed:27979964).
2 PublicationsGO - Molecular functioni
- ankyrin binding Source: UniProtKB
- calmodulin binding Source: UniProtKB
- ion channel binding Source: UniProtKB
Miscellaneous databases
RNActi | A0A088MLT8, protein |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 47 – 67 | IQAdd BLAST | 21 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 415 – 559 | Required for interaction with ankyrins1 PublicationAdd BLAST | 145 |
Coiled coil
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Coiled coili | 496 – 530 | Sequence analysisAdd BLAST | 35 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 71 – 142 | Ser-richPROSITE-ProRule annotationAdd BLAST | 72 |
Keywords - Domaini
Coiled coilPhylogenomic databases
GeneTreei | ENSGT00390000011127 |
OMAi | XLQSGMN |
OrthoDBi | 1290403at2759 |
Family and domain databases
InterProi | View protein in InterPro IPR029362, IQCJ-SCHIP1_N IPR039045, SCHIP_1 IPR015649, SCHIP_1_C |
PANTHERi | PTHR13103, PTHR13103, 1 hit |
Pfami | View protein in Pfam PF15157, IQCJ-SCHIP1, 1 hit PF10148, SCHIP-1, 1 hit |
s (7)i Sequence
Sequence statusi: Complete.
This entry describes 7 produced by isoformsialternative splicing. AlignAdd to basketThis isoform has been chosen as the sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. canonicali
10 20 30 40 50
MRLEELKRLQ NPLEQVDDGK YLLENHQLAM DVENNIENYP LSLQPLESKV
60 70 80 90 100
KIIQRAWREY LQRQDPLEKR SPSPPSVSSD KLSSSVSMNT FSDSSTPDYR
110 120 130 140 150
EDGMDLGSDA GSSSSSRASS QSNSTKVTPC SECKSSSSPG GSLDLVSALE
160 170 180 190 200
DYEEPFPVYQ KKVIDEWAPE EDGEEEEEED DRGYRDDGCP AREPGDVSAR
210 220 230 240 250
IGSSGSGSRS AATTMPSPMP NGNLHPHDPQ DLRHNGNVVV AGRPNASRVP
260 270 280 290 300
RRPIQKTQPP GSRRGGRNRA SGGLCLQPPD GGTRVPEEPP APPMDWEALE
310 320 330 340 350
KHLAGLQFRE QEVRNQGQAR TNSTSAQKNE RESIRQKLAL GSFFDDGPGI
360 370 380 390 400
YTSCSKSGKP SLSARLQSGM NLQICFVNDS GSDKDSDADD SKTETSLDTP
410 420 430 440 450
LSPMSKQSSS YSDRDTTEEE SESLDDMDFL TRQKKLQAEA KMALAMAKPM
460 470 480 490 500
AKMQVEVEKQ NRKKSPVADL LPHMPHISEC LMKRSLKPTD LRDMTIGQLQ
510 520 530 540 550
VIVNDLHSQI ESLNEELVQL LLIRDELHTE QDAMLVDIED LTRHAESQQK
HMAEKMPAK
The sequence of this isoform differs from the canonical sequence as follows:
98-325: Missing.
Isoforms of the same protein are often annotated in two different entries if their sequences differ significantly.
Isoforms of the same protein are often annotated in two different entries if their sequences differ significantly.
Isoforms of the same protein are often annotated in two different entries if their sequences differ significantly.
Isoforms of the same protein are often annotated in two different entries if their sequences differ significantly.
Isoforms of the same protein are often annotated in two different entries if their sequences differ significantly.
Alternative sequence
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Alternative sequenceiVSP_059226 | 98 – 325 | Missing in isoform Iqcj-schip1-2. Add BLAST | 228 |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | EU163409 mRNA Translation: ABW06762.1 KJ941154 mRNA Translation: AIN40496.1 |
CCDSi | CCDS79923.1 [A0A088MLT8-1] |
RefSeqi | NP_001106890.1, NM_001113419.2 [A0A088MLT8-1] |
Genome annotation databases
Ensembli | ENSMUST00000182006; ENSMUSP00000138212; ENSMUSG00000102422 [A0A088MLT8-1] |
GeneIDi | 100505386 |
KEGGi | mmu:100505386 |
UCSCi | uc056zsu.1, mouse [A0A088MLT8-1] |
Keywords - Coding sequence diversityi
Alternative splicingSimilar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | EU163409 mRNA Translation: ABW06762.1 KJ941154 mRNA Translation: AIN40496.1 |
CCDSi | CCDS79923.1 [A0A088MLT8-1] |
RefSeqi | NP_001106890.1, NM_001113419.2 [A0A088MLT8-1] |
3D structure databases
SMRi | A0A088MLT8 |
ModBasei | Search... |
Genome annotation databases
Ensembli | ENSMUST00000182006; ENSMUSP00000138212; ENSMUSG00000102422 [A0A088MLT8-1] |
GeneIDi | 100505386 |
KEGGi | mmu:100505386 |
UCSCi | uc056zsu.1, mouse [A0A088MLT8-1] |
Organism-specific databases
CTDi | 100505386 |
MGIi | MGI:5439400, Iqschfp |
Phylogenomic databases
GeneTreei | ENSGT00390000011127 |
OMAi | XLQSGMN |
OrthoDBi | 1290403at2759 |
Miscellaneous databases
ChiTaRSi | Gm21949, mouse |
PROi | PR:A0A088MLT8 |
RNActi | A0A088MLT8, protein |
SOURCEi | Search... |
Family and domain databases
InterProi | View protein in InterPro IPR029362, IQCJ-SCHIP1_N IPR039045, SCHIP_1 IPR015649, SCHIP_1_C |
PANTHERi | PTHR13103, PTHR13103, 1 hit |
Pfami | View protein in Pfam PF15157, IQCJ-SCHIP1, 1 hit PF10148, SCHIP-1, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | IQIP1_MOUSE | |
Accessioni | A0A088MLT8Primary (citable) accession number: A0A088MLT8 Secondary accession number(s): A8IJC6 Q9JLR0 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | November 22, 2017 |
Last sequence update: | November 22, 2017 | |
Last modified: | December 2, 2020 | |
This is version 29 of the entry and version 2 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Chordata Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- MGD cross-references
Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot