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Protein
Submitted name:

AsnC family transcriptional regulator

Gene

HA72_1956

Organism
Metallosphaera sedula
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi30 – 49H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
AsnC family transcriptional regulatorImported
Submitted name:
Transcriptional regulator, AsnC familyImported
Gene namesi
ORF Names:HA72_1956Imported, MsedA_2006Imported, MsedB_2008Imported, MsedC_2006Imported, MsedD_2007Imported, MsedE_2007Imported
OrganismiMetallosphaera sedulaImported
Taxonomic identifieri43687 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiSulfolobalesSulfolobaceaeMetallosphaera
Proteomesi
  • UP000062475 Componenti: Chromosome
  • UP000068832 Componenti: Chromosome
  • UP000062398 Componenti: Chromosome
  • UP000029084 Componenti: Chromosome
  • UP000061362 Componenti: Chromosome
  • UP000056255 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini11 – 72HTH asnC-typeInterPro annotationAdd BLAST62

Phylogenomic databases

eggNOGiarCOG01580 Archaea
COG1522 LUCA

Family and domain databases

Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR000485 AsnC-type_HTH_dom
IPR011008 Dimeric_a/b-barrel
IPR019888 Tscrpt_reg_AsnC-typ
IPR019887 Tscrpt_reg_AsnC/Lrp_C
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PfamiView protein in Pfam
PF01037 AsnC_trans_reg, 1 hit
PRINTSiPR00033 HTHASNC
SMARTiView protein in SMART
SM00344 HTH_ASNC, 1 hit
SUPFAMiSSF46785 SSF46785, 1 hit
SSF54909 SSF54909, 1 hit
PROSITEiView protein in PROSITE
PS50956 HTH_ASNC_2, 1 hit

Sequencei

Sequence statusi: Complete.

A0A088E9X7-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSNGGRKKVE LDTVDRRLLI ELLRDSRVSL RRLSEEMSVS PATLHNRLTR
60 70 80 90 100
LVQEGVIKGF TALVDYTKLG YSLSAIIMVK VNGKYLVEFE KEIANTDNIV
110 120 130 140 150
AVYDVVGEYD VVLIAKFRSV EDLDVFLKQL LKNNKVERTY TSIVLNAVKE

DPRVKI
Length:156
Mass (Da):17,760
Last modified:November 26, 2014 - v1
Checksum:i5864F4CD73B1EAB0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP008822 Genomic DNA Translation: AIM28080.1
CP012172 Genomic DNA Translation: AKV74907.1
CP012173 Genomic DNA Translation: AKV77145.1
CP012174 Genomic DNA Translation: AKV79395.1
CP012175 Genomic DNA Translation: AKV81640.1
CP012176 Genomic DNA Translation: AKV83871.1
RefSeqiWP_012021883.1, NZ_CP012176.1

Genome annotation databases

EnsemblBacteriaiAIM28080; AIM28080; HA72_1956
GeneIDi5103343
PATRICifig|43687.5.peg.2115

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP008822 Genomic DNA Translation: AIM28080.1
CP012172 Genomic DNA Translation: AKV74907.1
CP012173 Genomic DNA Translation: AKV77145.1
CP012174 Genomic DNA Translation: AKV79395.1
CP012175 Genomic DNA Translation: AKV81640.1
CP012176 Genomic DNA Translation: AKV83871.1
RefSeqiWP_012021883.1, NZ_CP012176.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAIM28080; AIM28080; HA72_1956
GeneIDi5103343
PATRICifig|43687.5.peg.2115

Phylogenomic databases

eggNOGiarCOG01580 Archaea
COG1522 LUCA

Family and domain databases

Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR000485 AsnC-type_HTH_dom
IPR011008 Dimeric_a/b-barrel
IPR019888 Tscrpt_reg_AsnC-typ
IPR019887 Tscrpt_reg_AsnC/Lrp_C
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PfamiView protein in Pfam
PF01037 AsnC_trans_reg, 1 hit
PRINTSiPR00033 HTHASNC
SMARTiView protein in SMART
SM00344 HTH_ASNC, 1 hit
SUPFAMiSSF46785 SSF46785, 1 hit
SSF54909 SSF54909, 1 hit
PROSITEiView protein in PROSITE
PS50956 HTH_ASNC_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A088E9X7_9CREN
AccessioniPrimary (citable) accession number: A0A088E9X7
Entry historyiIntegrated into UniProtKB/TrEMBL: November 26, 2014
Last sequence update: November 26, 2014
Last modified: September 12, 2018
This is version 21 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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