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Protein
Submitted name:

Laminin, beta 2-like

Gene
N/A
Organism
Poecilia formosa (Amazon molly) (Limia formosa)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Laminin, beta 2-likeImported
OrganismiPoecilia formosa (Amazon molly) (Limia formosa)Imported
Taxonomic identifieri48698 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataOvalentariaAtherinomorphaeCyprinodontiformesPoeciliidaePoeciliinaePoecilia
Proteomesi
  • UP000028760 Componenti: Unassembled WGS sequence

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 27Sequence analysisAdd BLAST27
ChainiPRO_500183477228 – 1846Sequence analysisAdd BLAST1819

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi307 ↔ 316PROSITE-ProRule annotation
Disulfide bondi372 ↔ 381PROSITE-ProRule annotation
Disulfide bondi435 ↔ 444PROSITE-ProRule annotation
Disulfide bondi488 ↔ 497PROSITE-ProRule annotation
Disulfide bondi500 ↔ 514PROSITE-ProRule annotation
Disulfide bondi517 ↔ 529PROSITE-ProRule annotation
Disulfide bondi519 ↔ 536PROSITE-ProRule annotation
Disulfide bondi538 ↔ 547PROSITE-ProRule annotation
Disulfide bondi828 ↔ 840PROSITE-ProRule annotation
Disulfide bondi830 ↔ 847PROSITE-ProRule annotation
Disulfide bondi849 ↔ 858PROSITE-ProRule annotation
Disulfide bondi876 ↔ 888PROSITE-ProRule annotation
Disulfide bondi878 ↔ 895PROSITE-ProRule annotation
Disulfide bondi897 ↔ 906PROSITE-ProRule annotation
Disulfide bondi941 ↔ 950PROSITE-ProRule annotation
Disulfide bondi1001 ↔ 1010PROSITE-ProRule annotation
Disulfide bondi1055 ↔ 1064PROSITE-ProRule annotation
Disulfide bondi1111 ↔ 1120PROSITE-ProRule annotation
Disulfide bondi1139 ↔ 1151PROSITE-ProRule annotation
Disulfide bondi1141 ↔ 1158PROSITE-ProRule annotation
Disulfide bondi1160 ↔ 1169PROSITE-ProRule annotation
Disulfide bondi1187 ↔ 1199PROSITE-ProRule annotation
Disulfide bondi1189 ↔ 1206PROSITE-ProRule annotation
Disulfide bondi1208 ↔ 1217PROSITE-ProRule annotation

Keywords - PTMi

Disulfide bondPROSITE-ProRule annotationSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini38 – 277Laminin N-terminalInterPro annotationAdd BLAST240
Domaini278 – 341Laminin EGF-likeInterPro annotationAdd BLAST64
Domaini342 – 404Laminin EGF-likeInterPro annotationAdd BLAST63
Domaini405 – 464Laminin EGF-likeInterPro annotationAdd BLAST60
Domaini465 – 516Laminin EGF-likeInterPro annotationAdd BLAST52
Domaini517 – 558Laminin EGF-likeInterPro annotationAdd BLAST42
Domaini556 – 822Laminin IV type BInterPro annotationAdd BLAST267
Domaini828 – 875Laminin EGF-likeInterPro annotationAdd BLAST48
Domaini876 – 921Laminin EGF-likeInterPro annotationAdd BLAST46
Domaini922 – 971Laminin EGF-likeInterPro annotationAdd BLAST50
Domaini972 – 1030Laminin EGF-likeInterPro annotationAdd BLAST59
Domaini973 – 1011EGF-likeInterPro annotationAdd BLAST39
Domaini1031 – 1082Laminin EGF-likeInterPro annotationAdd BLAST52
Domaini1083 – 1138Laminin EGF-likeInterPro annotationAdd BLAST56
Domaini1139 – 1186Laminin EGF-likeInterPro annotationAdd BLAST48
Domaini1187 – 1233Laminin EGF-likeInterPro annotationAdd BLAST47

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili1276 – 1296Sequence analysisAdd BLAST21
Coiled coili1341 – 1361Sequence analysisAdd BLAST21
Coiled coili1434 – 1454Sequence analysisAdd BLAST21
Coiled coili1510 – 1530Sequence analysisAdd BLAST21
Coiled coili1623 – 1650Sequence analysisAdd BLAST28
Coiled coili1658 – 1685Sequence analysisAdd BLAST28
Coiled coili1742 – 1762Sequence analysisAdd BLAST21
Coiled coili1772 – 1792Sequence analysisAdd BLAST21
Coiled coili1800 – 1841Sequence analysisAdd BLAST42

Keywords - Domaini

Coiled coilSequence analysis, EGF-like domainPROSITE-ProRule annotation, Laminin EGF-like domainPROSITE-ProRule annotationSAAS annotation, RepeatSAAS annotation, SignalSequence analysis

Phylogenomic databases

GeneTreeiENSGT00780000121851
OMAiRPFCFEP
OrthoDBiEOG091G009B

Family and domain databases

Gene3Di2.60.120.1490, 1 hit
InterProiView protein in InterPro
IPR013032 EGF-like_CS
IPR000742 EGF-like_dom
IPR002049 Laminin_EGF
IPR013015 Laminin_IV_B
IPR008211 Laminin_N
IPR038684 Laminin_N_sf
PfamiView protein in Pfam
PF00053 Laminin_EGF, 12 hits
PF00055 Laminin_N, 1 hit
SMARTiView protein in SMART
SM00181 EGF, 9 hits
SM00180 EGF_Lam, 13 hits
SM00136 LamNT, 1 hit
PROSITEiView protein in PROSITE
PS00022 EGF_1, 1 hit
PS50026 EGF_3, 1 hit
PS01248 EGF_LAM_1, 6 hits
PS50027 EGF_LAM_2, 13 hits
PS51116 LAMININ_IVB, 1 hit
PS51117 LAMININ_NTER, 1 hit

Sequencei

Sequence statusi: Complete.

A0A087YNH3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSIHLAIKMP IKIIHLSLLV LALNAFGQEL PSSPHGCTEG SCYPATGNLL
60 70 80 90 100
IGRAVNLTAT STCGLDGPEQ FCIVSYLQDP EKCFECDSRR PYDPYHHRNS
110 120 130 140 150
HRIENVIYLT DLNGNENFWK SVNGKEDVSI RLNLEAEFHF THLIMKFKTF
160 170 180 190 200
RPAALIIERS ADFGRTWRPY RYFAKNCTRT FPGIPANGLH HINDVICEER
210 220 230 240 250
YSDIEPSKDG EVIFKVLDPA IPVEDPYSLE IQELLRITNL RINFTKLNTL
260 270 280 290 300
GDDLLDRRSD VLQKYYYAIN ELVVRGSCFC YGHASECAPV PGVNTHETGM
310 320 330 340 350
IHGRCVCKHN TEGLNCERCK VFHNDSPWRP AETEDPHTCR ECNCNGHTNQ
360 370 380 390 400
CHFDMAVYLA LGNTSGGVCD NCLHNTMGRN CEMCKPFYYQ DPNRDIRDPR
410 420 430 440 450
VCVACDCDPV GSLEGGMCDS HTDLGMGMIA GQCRCKYNVK GKRCDDCKAG
460 470 480 490 500
YYGLSESDPL GCQPCNCDPR GIILMDAPCD QISGDCSCKR YVTGRYCNQC
510 520 530 540 550
LPEYWGLSND LGGCRPCECD FGGAYNNRCM MDSGQCDCRR HFIGRQCSEV
560 570 580 590 600
QPGYFCAPLD YYKYEAEEAA GRSPTDPSLP GQVRPQAADD CIQQLSNQAR
610 620 630 640 650
RHRRHRRISS LQQSQAALRR IRQLQQTPDV TTVHREHAPS HITTWTGPGF
660 670 680 690 700
ARVKDGAGLV FTIDNIPYAM EYEVMIRYEP ESTEDWEAVV SITSVELPSS
710 720 730 740 750
LRCGNLLPAE QLYTETLLHR NRYILMSRPF CFEPSNRYVI AIRFQRHGVA
760 770 780 790 800
YRHLTAFILI DSLVLIPKYT ELPGFHGSDP DSEQHREDMI RYMCLDSFMI
810 820 830 840 850
TPMPALAEMC SKLICGISAN IHDGALACQC DPQGSISGEC DKVGGQCRCK
860 870 880 890 900
ANVIGRQCDQ CAPGTYGFGV NGCNACDCHP EGSFSHQCDP VTGQCPCRQG
910 920 930 940 950
ATGRQCSDCQ PGQWGFPSCS PCQCNGHADL CDPRTGECRG CRDNTAGHLC
960 970 980 990 1000
ERCVEGFYGN PVLGSGDHCH PCPCPGNPGS NHFNGHSCQT DHTSDQIICN
1010 1020 1030 1040 1050
CKPGYTGPRC DQCAPGYYGN PEQPGGQCLR CECNDNIDPQ DPGSCDPRTG
1060 1070 1080 1090 1100
QCLRCLYHTD GPSCSRCEEG YFGNALIRDC RRCTCVTAGT VVSACSEGQC
1110 1120 1130 1140 1150
LCDHYTGACP CRASVMGNNC DQCAPNHWNY GQPEGCQPCN CDQRHSEGDW
1160 1170 1180 1190 1200
CNMFTGQCPC WPGFGGQRCT ECREHHWGDP QVECRECGCH PLGSQTRQCN
1210 1220 1230 1240 1250
RVTGQCECKD GMAGVRCDEC ARGFTGVFPN CVPCHQCFYQ ADDHLCQIRR
1260 1270 1280 1290 1300
DLEHIQYAVQ KILESGITPG DGMNRITELE QKLNQVRDLI DTGDTERIHQ
1310 1320 1330 1340 1350
LIGQSIDDLR PEIVLINSRL TGIDQDTNKT KEADEVLRRT LTDLEKELMD
1360 1370 1380 1390 1400
VNATLALKQE LLDKYLTSGF LDQFDKVKKY YQVSQQAEER CNASVLFPTS
1410 1420 1430 1440 1450
PVEQSKQTRG ITEKLLNTTK GQLLRNLTAH NNSLNELHQK TQNLSETVQH
1460 1470 1480 1490 1500
LSQKVCGGAS NTSQHGSCSD NQCGCHDNQG NFVCGGEGCN GTKSSSLTAL
1510 1520 1530 1540 1550
KDATNLTDSL KAAMKELQGV TKKLQDIASQ TQDVKNRTMN ALEKAQKKKE
1560 1570 1580 1590 1600
YFEKSNKDLK DFIKTIKDFL TEEGADPESI QKVAQQVLDI NLPLNRTTVD
1610 1620 1630 1640 1650
KLINQINSSI ANLTNVQDIM NQTSQFIRNA QDLMNKAKEA ERQAVGVRDL
1660 1670 1680 1690 1700
VNSTKQALNV SEVAIEKAKA ALKEARHNLN STKNSTAEVE KGLVQLEDKQ
1710 1720 1730 1740 1750
MDIMMLLTNL SKGVEALKNK TEMNRLMAKD AINLANNATH QASTLVQKLN
1760 1770 1780 1790 1800
VTEKRYRELQ LKMESLGSSG TLNNIQQKVK DMTKDAEDLL SKANNGINDL
1810 1820 1830 1840
DKLGELLKSN EERMKKQREE LEDLKQNATD VRDQIQEEVR KYSSCV
Length:1,846
Mass (Da):205,829
Last modified:November 26, 2014 - v2
Checksum:i7921BD1057210BA9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AYCK01014099 Genomic DNA No translation available.
AYCK01014100 Genomic DNA No translation available.
AYCK01014101 Genomic DNA No translation available.
RefSeqiXP_007571360.1, XM_007571298.2
XP_007571361.1, XM_007571299.2
XP_016536854.1, XM_016681368.1

Genome annotation databases

EnsembliENSPFOT00000019598; ENSPFOP00000019576; ENSPFOG00000019449
GeneIDi103151312

Similar proteinsi

Entry informationi

Entry nameiA0A087YNH3_POEFO
AccessioniPrimary (citable) accession number: A0A087YNH3
Entry historyiIntegrated into UniProtKB/TrEMBL: October 29, 2014
Last sequence update: November 26, 2014
Last modified: July 18, 2018
This is version 32 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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