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Protein
Submitted name:

Family with sequence similarity 13, member C1, isoform CRA_g

Gene

FAM13C

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Family with sequence similarity 13, member C1, isoform CRA_gImported
Submitted name:
Protein FAM13CImported
Gene namesi
Name:FAM13CImported
Synonyms:FAM13C1Imported
ORF Names:hCG_41127Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 10

Organism-specific databases

EuPathDBiHostDB:ENSG00000148541.12
HGNCiHGNC:19371 FAM13C

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000148541

PTM / Processingi

Proteomic databases

PeptideAtlasiA0A087X216

Expressioni

Gene expression databases

BgeeiENSG00000148541 Expressed in 189 organ(s), highest expression level in corpus callosum
ExpressionAtlasiA0A087X216 baseline and differential

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili307 – 334Sequence analysisAdd BLAST28
Coiled coili538 – 558Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG410IJJ8 Eukaryota
ENOG410YAKN LUCA
GeneTreeiENSGT00440000037511

Family and domain databases

InterProiView protein in InterPro
IPR039102 FAM13
PANTHERiPTHR15904 PTHR15904, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 7 potential isoforms that are computationally mapped.Show allAlign All

A0A087X216-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MFSCFCFSLQ DNSFSSTTVT ECDEDPVSLH EDQTDCSSLR DENNKENYPD
60 70 80 90 100
AGALVEEHAP PSWEPQQQNV EATVLVDSVL RPSMGNFKSR KPKSIFKAES
110 120 130 140 150
GRSHGESQET EHVVSSQSEC QVRAGTPAHE SPQNNAFKCQ ETVRLQPRID
160 170 180 190 200
QRTAISPKDA FETRQDLNEN SLLKLQALES DLCSAFLTNQ EEAAQVHGVK
210 220 230 240 250
DPAPASTQSV LADGTDSADP SPVHKDGQNE ADSAPEDLHS VGTSRLLYHI
260 270 280 290 300
TDGDNPLLSP RCSIFSQSQR FNLDPESAPS PPSTQQFMMP RSSSRCSCGD
310 320 330 340 350
GKEPQTITQL TKHIQSLKRK IRKFEEKFEQ EKKYRPSHGD KTSNPEVLKW
360 370 380 390 400
MNDLAKGRKQ LKELKLKLSE EQGSAPKGPP RNLLCEQPTV PRENGKPEAA
410 420 430 440 450
GPEPSSSGEE TPDAALTCLK ERREQLPPQE DSKVTKQDKN LIKPLYDRYR
460 470 480 490 500
IIKQILSTPS LIPTIEEEDS DEDRPQGSQQ PSLADPASHL PVGDHLTYSN
510 520 530 540 550
ETEPVRALLP DEKKEVKPPA LSMSNLHEAT MPVLLDHLRE TRADKKRLRK
560 570 580 590 600
ALREFEEQFF KQTGRSPQKE DRIPMADEYY EYKHIKAKLR LLEVLISKQD

VAKTI
Length:605
Mass (Da):67,890
Last modified:October 29, 2014 - v1
Checksum:iF0B4B6C6D67980AF
GO

Computationally mapped potential isoform sequencesi

There are 7 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q8NE31FA13C_HUMAN
Protein FAM13C
FAM13C FAM13C1
585Annotation score:
B7Z2K3B7Z2K3_HUMAN
cDNA FLJ54631, highly similar to Pr...
FAM13C
573Annotation score:
A0A087X0M7A0A087X0M7_HUMAN
Protein FAM13C
FAM13C
606Annotation score:
H0YGW3H0YGW3_HUMAN
Protein FAM13C
FAM13C
134Annotation score:
D6RIX4D6RIX4_HUMAN
Protein FAM13C
FAM13C
25Annotation score:
A0A087X1H9A0A087X1H9_HUMAN
Protein FAM13C
FAM13C
49Annotation score:
A0A087X2G4A0A087X2G4_HUMAN
Protein FAM13C
FAM13C
50Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC025038 Genomic DNA No translation available.
AL355474 Genomic DNA No translation available.
KF459662 Genomic DNA No translation available.
CH471083 Genomic DNA Translation: EAW54193.1
UniGeneiHs.607594

Genome annotation databases

EnsembliENST00000621119; ENSP00000484625; ENSG00000148541
UCSCiuc057tka.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC025038 Genomic DNA No translation available.
AL355474 Genomic DNA No translation available.
KF459662 Genomic DNA No translation available.
CH471083 Genomic DNA Translation: EAW54193.1
UniGeneiHs.607594

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PeptideAtlasiA0A087X216

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000621119; ENSP00000484625; ENSG00000148541
UCSCiuc057tka.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000148541.12
HGNCiHGNC:19371 FAM13C
OpenTargetsiENSG00000148541
GenAtlasiSearch...

Phylogenomic databases

eggNOGiENOG410IJJ8 Eukaryota
ENOG410YAKN LUCA
GeneTreeiENSGT00440000037511

Gene expression databases

BgeeiENSG00000148541 Expressed in 189 organ(s), highest expression level in corpus callosum
ExpressionAtlasiA0A087X216 baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR039102 FAM13
PANTHERiPTHR15904 PTHR15904, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A087X216_HUMAN
AccessioniPrimary (citable) accession number: A0A087X216
Entry historyiIntegrated into UniProtKB/TrEMBL: October 29, 2014
Last sequence update: October 29, 2014
Last modified: September 12, 2018
This is version 28 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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