UniProtKB - A0A087X101 (A0A087X101_HUMAN)
Protein
Submitted name:
Cleavage and polyadenylation-specificity factor subunit 1
Gene
CPSF1
Organism
Homo sapiens (Human)
Status
Names & Taxonomyi
Protein namesi | Submitted name: Cleavage and polyadenylation-specificity factor subunit 1Imported |
Gene namesi | Name:CPSF1Imported |
Organismi | Homo sapiens (Human)Imported |
Taxonomic identifieri | 9606 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Proteomesi |
|
Organism-specific databases
EuPathDBi | HostDB:ENSG00000071894.14 |
HGNCi | HGNC:2324, CPSF1 |
Subcellular locationi
Nucleus
- nucleus Source: InterPro
Expressioni
Gene expression databases
Bgeei | ENSG00000071894, Expressed in right testis and 119 other tissues |
ExpressionAtlasi | A0A087X101, baseline and differential |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 1 – 169 | CPSF_AInterPro annotationAdd BLAST | 169 |
Phylogenomic databases
GeneTreei | ENSGT00950000183151 |
HOGENOMi | CLU_111180_0_0_1 |
Family and domain databases
Gene3Di | 2.130.10.10, 1 hit |
InterProi | View protein in InterPro IPR004871, Cleavage/polyA-sp_fac_asu_C IPR015943, WD40/YVTN_repeat-like_dom_sf |
Pfami | View protein in Pfam PF03178, CPSF_A, 1 hit |
(1+)i Sequence
Sequence statusi: Complete.
This entry has 1 described isoform and 3 potential isoforms that are computationally mapped.Show allAlign All
A0A087X101-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MKSISLLRYQ EESKTLSLVS RVHLWRRCSC LVSDRDRNLM VYMYLPEAKE
60 70 80 90 100
SFGGMRLLRR ADFHVGAHVN TFWRTPCRGA TEGLSKKSVV WENKHITWFA
110 120 130 140 150
TLDGGIGLLL PMQEKTYRRL LMLQNALTTM LPHHAGLNPR AFRMLHVDRR
160 170 180 190 200
TLQNAVRNVL DGELLNRYLY LSTMERSELA KKIGTTPDII LDDLLETDRV
TAHF
Computationally mapped potential isoform sequencesi
There are 3 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basketQ10570 | CPSF1_HUMAN | Cleavage and polyadenylation specif... | CPSF1 CPSF160 | 1,443 | Annotation score: | ||
A0A087WTV4 | A0A087WTV4_HUMAN | Cleavage and polyadenylation-specif... | CPSF1 | 169 | Annotation score: | ||
E9PIM1 | E9PIM1_HUMAN | Cleavage and polyadenylation-specif... | CPSF1 | 148 | Annotation score: |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AC233992 Genomic DNA No translation available. |
Genome annotation databases
Ensembli | ENST00000531727; ENSP00000483775; ENSG00000071894 |
UCSCi | uc064rls.1, human |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AC233992 Genomic DNA No translation available. |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Proteomic databases
PeptideAtlasi | A0A087X101 |
Protocols and materials databases
Antibodypediai | 14844, 72 antibodies |
Genome annotation databases
Ensembli | ENST00000531727; ENSP00000483775; ENSG00000071894 |
UCSCi | uc064rls.1, human |
Organism-specific databases
EuPathDBi | HostDB:ENSG00000071894.14 |
HGNCi | HGNC:2324, CPSF1 |
GenAtlasi | Search... |
Phylogenomic databases
GeneTreei | ENSGT00950000183151 |
HOGENOMi | CLU_111180_0_0_1 |
Miscellaneous databases
ChiTaRSi | CPSF1, human |
Gene expression databases
Bgeei | ENSG00000071894, Expressed in right testis and 119 other tissues |
ExpressionAtlasi | A0A087X101, baseline and differential |
Family and domain databases
Gene3Di | 2.130.10.10, 1 hit |
InterProi | View protein in InterPro IPR004871, Cleavage/polyA-sp_fac_asu_C IPR015943, WD40/YVTN_repeat-like_dom_sf |
Pfami | View protein in Pfam PF03178, CPSF_A, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | A0A087X101_HUMAN | |
Accessioni | A0A087X101Primary (citable) accession number: A0A087X101 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | October 29, 2014 |
Last sequence update: | October 29, 2014 | |
Last modified: | August 12, 2020 | |
This is version 28 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) | |
Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. |