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Protein
Submitted name:

E3 ubiquitin-protein ligase RBBP6

Gene

RBBP6

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
E3 ubiquitin-protein ligase RBBP6Imported
Gene namesi
Name:RBBP6Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 16

Organism-specific databases

EuPathDBiHostDB:ENSG00000122257.18
HGNCiHGNC:9889 RBBP6

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000122257

PTM / Processingi

Proteomic databases

PeptideAtlasiA0A087WY32

Expressioni

Gene expression databases

BgeeiENSG00000122257 Expressed in 229 organ(s), highest expression level in placenta
ExpressionAtlasiA0A087WY32 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliA0A087WY32
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini13 – 27CCHC-typeInterPro annotationAdd BLAST15

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG0314 Eukaryota
COG5222 LUCA
GeneTreeiENSGT00610000086096

Family and domain databases

Gene3Di3.30.40.10, 1 hit
InterProiView protein in InterPro
IPR033489 RBBP6
IPR025829 Zn_knuckle_CX2CX3GHX4C
IPR001878 Znf_CCHC
IPR036875 Znf_CCHC_sf
IPR013083 Znf_RING/FYVE/PHD
PANTHERiPTHR15439:SF3 PTHR15439:SF3, 1 hit
PfamiView protein in Pfam
PF13696 zf-CCHC_2, 1 hit
SMARTiView protein in SMART
SM00343 ZnF_C2HC, 1 hit
SUPFAMiSSF57756 SSF57756, 1 hit
PROSITEiView protein in PROSITE
PS50158 ZF_CCHC, 1 hit

Sequence (1+)i

Sequence statusi: Fragment.

This entry has 1 described isoform and 5 potential isoforms that are computationally mapped.Show allAlign All

A0A087WY32-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
XKPLGPPPPS YTCFRCGKPG HYIKNCPTNG DKNFESGPRI KKSTGIPRSF
60 70 80 90 100
MMEVKDPNMK GAMLTNTGKY AIPTIDAEAY AIGKKEKPPF LPEEPSSSSE
110 120 130
EDDPIPDELL CLICKDIMTD AVVIPCCGNS YCDECKKC
Length:138
Mass (Da):15,106
Last modified:October 29, 2014 - v1
Checksum:i0496C6BCB2724663
GO

Computationally mapped potential isoform sequencesi

There are 5 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q7Z6E9RBBP6_HUMAN
E3 ubiquitin-protein ligase RBBP6
RBBP6 P2PR, PACT, RBQ1, My038
1,792Annotation score:
H3BUN0H3BUN0_HUMAN
E3 ubiquitin-protein ligase RBBP6
RBBP6
300Annotation score:
A0A2R8Y880A0A2R8Y880_HUMAN
E3 ubiquitin-protein ligase RBBP6
RBBP6
1,759Annotation score:
H3BSK8H3BSK8_HUMAN
E3 ubiquitin-protein ligase RBBP6
RBBP6
1,008Annotation score:
I3L3Y2I3L3Y2_HUMAN
E3 ubiquitin-protein ligase RBBP6
RBBP6
158Annotation score:

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC010321 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000562683; ENSP00000481477; ENSG00000122257
UCSCiuc059sff.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC010321 Genomic DNA No translation available.

3D structure databases

ProteinModelPortaliA0A087WY32
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PeptideAtlasiA0A087WY32

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000562683; ENSP00000481477; ENSG00000122257
UCSCiuc059sff.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000122257.18
HGNCiHGNC:9889 RBBP6
OpenTargetsiENSG00000122257
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG0314 Eukaryota
COG5222 LUCA
GeneTreeiENSGT00610000086096

Miscellaneous databases

ChiTaRSiRBBP6 human

Gene expression databases

BgeeiENSG00000122257 Expressed in 229 organ(s), highest expression level in placenta
ExpressionAtlasiA0A087WY32 baseline and differential

Family and domain databases

Gene3Di3.30.40.10, 1 hit
InterProiView protein in InterPro
IPR033489 RBBP6
IPR025829 Zn_knuckle_CX2CX3GHX4C
IPR001878 Znf_CCHC
IPR036875 Znf_CCHC_sf
IPR013083 Znf_RING/FYVE/PHD
PANTHERiPTHR15439:SF3 PTHR15439:SF3, 1 hit
PfamiView protein in Pfam
PF13696 zf-CCHC_2, 1 hit
SMARTiView protein in SMART
SM00343 ZnF_C2HC, 1 hit
SUPFAMiSSF57756 SSF57756, 1 hit
PROSITEiView protein in PROSITE
PS50158 ZF_CCHC, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A087WY32_HUMAN
AccessioniPrimary (citable) accession number: A0A087WY32
Entry historyiIntegrated into UniProtKB/TrEMBL: October 29, 2014
Last sequence update: October 29, 2014
Last modified: September 12, 2018
This is version 32 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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