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Entry version 17 (11 Dec 2019)
Sequence version 1 (29 Oct 2014)
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Protein
Submitted name:

Uncharacterized protein

Gene

X975_25373

Organism
Stegodyphus mimosarum (African social velvet spider)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Uncharacterized proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:X975_25373Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiStegodyphus mimosarum (African social velvet spider)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri407821 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaChelicerataArachnidaAraneaeAraneomorphaeEntelegynaeEresoideaEresidaeStegodyphus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000054359 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Unassembled WGS sequence

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini621 – 893Reverse transcriptaseInterPro annotationAdd BLAST273
Domaini1058 – 1188RNase HInterPro annotationAdd BLAST131

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni66 – 109DisorderedSequence analysisAdd BLAST44

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and domains’ section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili443 – 463Sequence analysisAdd BLAST21

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

Database of Orthologous Groups

More...
OrthoDBi
1233632at2759

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
3.30.420.10, 1 hit
3.60.10.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR036691 Endo/exonu/phosph_ase_sf
IPR005135 Endo/exonuclease/phosphatase
IPR012337 RNaseH-like_sf
IPR002156 RNaseH_domain
IPR036397 RNaseH_sf
IPR000477 RT_dom

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF14529 Exo_endo_phos_2, 1 hit
PF00075 RNase_H, 1 hit
PF00078 RVT_1, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF53098 SSF53098, 1 hit
SSF56219 SSF56219, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50879 RNASE_H, 1 hit
PS50878 RT_POL, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Fragment.

A0A087TAD8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MRTGSQNISV PNVVTDAKSL ATYNKTATTR NTAPSAPVHI TSKTAPRCIQ
60 70 80 90 100
HASTAQISII RQKAQSFVDT QRTTPPAPPT RSTSRGFDAA PATNPTIPQP
110 120 130 140 150
SQSYLNSAQA HSLPLQSPSA CHNLSPAHSP PDICNLTVTT PDSLLKCIQI
160 170 180 190 200
NLQRAKAATI QATAHAIQND TDILLIQEPY CKNGQVASFP LSWRTIQVNE
210 220 230 240 250
NTQAPRAAII ICNPIWTPVI VTTERDCVAI LLETSDMTLI LSSIYSSPAD
260 270 280 290 300
TIMEATAAMD RIRLKCPSAH TIFSGDFNAH HSIWGYADIN RKGQELEDYI
310 320 330 340 350
AANNLHLHNS IDAPPTFDNT YNKGWPDLTL SSHNASHLLQ NWEVSDDCSL
360 370 380 390 400
SDHKYIHFHI STSTTIPILK RYRLPKGKIK TVKRQFHDLL TRELPSLQSC
410 420 430 440 450
HNTADLDQYT NHLTQELQKC CDSTLPIRTA KKIQGLSWWS KDLRQQRQKC
460 470 480 490 500
RALRRRLTKA DTLEERTYFL TQFRKERTTY KRSILTAKTT TWKKFCSENS
510 520 530 540 550
DPFGILHKIS TNKVFRPHQI YLQQQTANSN TSLTSNTAAI ILSTVFPSDN
560 570 580 590 600
PADDSPEQKL LRNNHAAPMT QDDIPFTKQE ITQIYRTLPK KKAPGPDGLD
610 620 630 640 650
YSILKVAYKS HPIFFLYFFN ILLKHELFPS AFKTGQVVFF TKKNKDPQSP
660 670 680 690 700
SSLRPICLLP ALGKVYEKLI VQRLNFHLQD SRILSSRQFG FRSGLSTLHA
710 720 730 740 750
LEEVRRIIHH NKEQQLHTAF VSIDLQSAFD TLWWPAIKQA LRSSRCPRNI
760 770 780 790 800
YGIFESYLQN RFLLVPHNNG TTIKQQERGC PQGSCAGPVL WNLTFNSIIS
810 820 830 840 850
TNWPKHTQLV AYADDVAFLI QGRTRNELED RSTQILQKFS FLCQELKLTI
860 870 880 890 900
STAKSTALII PKPGTNPSRN PCIKLQEKNI KIVKELKYLG LTWDKGLTWI
910 920 930 940 950
PHLQQLKIKT QAIARKARQF QGINWGRNPY INKILYTTVI EPIALYAAAI
960 970 980 990 1000
WATPMQSRKL KQLQTIQRPF ALMMCKGFRT TATSAAIILA GIPPLYLRAE
1010 1020 1030 1040 1050
QEATITRVLQ LRKDATFHDT THSPTFYESP RPTQRPHPGT QGRNFRITID
1060 1070 1080 1090 1100
NNSIPSIPNT THVYYTDGSK IEDGVGSAYI CYHQNDEHTS WKAALRHFNS
1110 1120 1130 1140 1150
VFQAEALAIL NATNNILNNG YHQACICTDS QSSLLAIQNL SHTSPIISEI
1160 1170 1180 1190 1200
QKLLSVNHQQ HIQLTWVRAH AGLDGNEAAD TLAKEAATSS EVQQIHIRAP
1210 1220 1230 1240 1250
PSHLKRLLKE DLLKKWQEDW NACDTGRRTY NLLPKVSPSR LIAIPQLTRF
1260 1270 1280 1290 1300
ITGHGPYPAY YYRHNISTTD ACVCGQLGSP EHYIYSCPLT ANNHIKHPTP
1310 1320 1330 1340 1350
PTDAFQRFLI KNKPSINKIC KKTLTMSLHP QVINSVTVSE LQELSFSCAC
1360 1370
NAFNIEKFPQ LSCRDRGENY
Length:1,370
Mass (Da):154,649
Last modified:October 29, 2014 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i26FFBE4066B2E15F
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section is used for sequence fragments to indicate that the residue at the extremity of the sequence is not the actual terminal residue in the complete protein sequence.<p><a href='/help/non_ter' target='_top'>More...</a></p>Non-terminal residuei1370Imported1

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
KK114278 Genomic DNA Translation: KFM62077.1

Genome annotation databases

Ensembl metazoan genome annotation project

More...
EnsemblMetazoai
KFM62077; KFM62077; X975_25373

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KK114278 Genomic DNA Translation: KFM62077.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Genome annotation databases

EnsemblMetazoaiKFM62077; KFM62077; X975_25373

Phylogenomic databases

OrthoDBi1233632at2759

Family and domain databases

Gene3Di3.30.420.10, 1 hit
3.60.10.10, 1 hit
InterProiView protein in InterPro
IPR036691 Endo/exonu/phosph_ase_sf
IPR005135 Endo/exonuclease/phosphatase
IPR012337 RNaseH-like_sf
IPR002156 RNaseH_domain
IPR036397 RNaseH_sf
IPR000477 RT_dom
PfamiView protein in Pfam
PF14529 Exo_endo_phos_2, 1 hit
PF00075 RNase_H, 1 hit
PF00078 RVT_1, 1 hit
SUPFAMiSSF53098 SSF53098, 1 hit
SSF56219 SSF56219, 1 hit
PROSITEiView protein in PROSITE
PS50879 RNASE_H, 1 hit
PS50878 RT_POL, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A087TAD8_STEMI
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A087TAD8
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: October 29, 2014
Last sequence update: October 29, 2014
Last modified: December 11, 2019
This is version 17 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)
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