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Entry version 31 (12 Aug 2020)
Sequence version 1 (29 Oct 2014)
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Protein
Submitted name:

Uncharacterized protein

Gene

AALP_AA6G268100

Organism
Arabis alpina (Alpine rock-cress)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionDNA-bindingARBA annotation
Biological processTranscription, Transcription regulationARBA annotation

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Uncharacterized proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:AALP_AA6G268100Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiArabis alpina (Alpine rock-cress)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri50452 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliopsidaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeArabideaeArabis
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000029120 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 6

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusARBA annotation

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini9 – 103TF-B3InterPro annotationAdd BLAST95
Domaini153 – 249TF-B3InterPro annotationAdd BLAST97
Domaini338 – 431TF-B3InterPro annotationAdd BLAST94
Domaini493 – 589TF-B3InterPro annotationAdd BLAST97
Domaini754 – 849TF-B3InterPro annotationAdd BLAST96
Domaini878 – 972TF-B3InterPro annotationAdd BLAST95
Domaini986 – 1065TF-B3InterPro annotationAdd BLAST80
Domaini1108 – 1204TF-B3InterPro annotationAdd BLAST97
Domaini1371 – 1467TF-B3InterPro annotationAdd BLAST97

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni106 – 148DisorderedSequence analysisAdd BLAST43
Regioni445 – 491DisorderedSequence analysisAdd BLAST47
Regioni616 – 666DisorderedSequence analysisAdd BLAST51
Regioni697 – 724DisorderedSequence analysisAdd BLAST28
Regioni1199 – 1246DisorderedSequence analysisAdd BLAST48
Regioni1328 – 1359DisorderedSequence analysisAdd BLAST32

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and domains' section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili275 – 295Sequence analysisAdd BLAST21

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi120 – 138PolyampholyteSequence analysisAdd BLAST19
Compositional biasi452 – 478PolyampholyteSequence analysisAdd BLAST27
Compositional biasi616 – 656PolyampholyteSequence analysisAdd BLAST41
Compositional biasi697 – 711PolarSequence analysisAdd BLAST15
Compositional biasi1207 – 1222AcidicSequence analysisAdd BLAST16

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG502SK57, Eukaryota

Database of Orthologous Groups

More...
OrthoDBi
246503at2759

Family and domain databases

Conserved Domains Database

More...
CDDi
cd10017, B3_DNA, 9 hits

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
2.40.330.10, 9 hits

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR003340, B3_DNA-bd
IPR015300, DNA-bd_pseudobarrel_sf
IPR039218, REM_fam

The PANTHER Classification System

More...
PANTHERi
PTHR31674, PTHR31674, 13 hits

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF02362, B3, 9 hits

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM01019, B3, 10 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF101936, SSF101936, 9 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50863, B3, 9 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All

A0A087GRX4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAKSTLLRHP QFFHTLVPGF HTHLVIPVGF FSKYIQGKSM EVEDTVELKS
60 70 80 90 100
GSSDITWKVK MTGQRFSDGW EDFAVANRLQ IGDVLLVRYE GDLVFHVSDL
110 120 130 140 150
GPNCSETRDI APPSSNNDDD DDNIEFHRKK KLRKNCPEGE GEAGSSSSSD
160 170 180 190 200
NSCFVATVTT SSLRTDTLHL PQHFTSSNGL TRKCCKIVLL DGGVRSWAVD
210 220 230 240 250
LSFNNSSDTF YISQGWRNFC DENGQEAGGF FMFKLVGSGE TLVLSFCPTE
260 270 280 290 300
SSNDRKQRDC SEASGRESIS TKVGCEEENI EVENSEDECS SMESLMEIES
310 320 330 340 350
SEDECSLVES LLEIEKTKYT PKQRFFSYSS YAPCQKRFVT FTLPPDYVRI
360 370 380 390 400
EKLSLPKQFA SENSVNKPGI IYLVGKDGTK WLTNLHRDTK GTMSLGKGWK
410 420 430 440 450
DFVKANGIKK GFTLKLIWED TTPVLRLCDA ESTIDKAQEE LSKTNETESL
460 470 480 490 500
VIDSSNRDKI KRDENNKEES RSWDRNNNYT RGKDSTPSSE NQLVTLTITP
510 520 530 540 550
SSFIKCRLGL PKCFTKENCI NKPGMITLLG KDGIKQPTKL LFNKVKGVMV
560 570 580 590 600
LGGGWKSFVK ENGLKTGDSF TLKLIWEDTT PVLSLCPAEQ SIDKRGVCSE
610 620 630 640 650
TNQKKSFPIE PTSCKKISKD ENIKDDNSKE KNNKEENSKG ENPLMEREKT
660 670 680 690 700
HLRGRDSTPS SQKQFLTLTI TPSSFTQCRL TLPAPFVREN NMNKPGMIYL
710 720 730 740 750
GESSSSKANE KESVSTEPRS RDSSSAIQNQ FVTLTITPSS FTQCRLVSLS
760 770 780 790 800
DNSCLRVLSX XXXFTQCRLT LAAPFVREND MNKPGMIYLV GKDGTKWPTN
810 820 830 840 850
LQRDNKGTMS LGKGWKDFVK AHDLKLGDSF TMELIWQDTI PMLSWFRTES
860 870 880 890 900
SSSKANEKES VSNEPRSRDS SSAIQNQFVT LALTPEDVKA CQLHLPSQFM
910 920 930 940 950
KANGINKLGK MTLLGENEME WSGYLLTKDG TVALGKGWDE FCEANGVKSG
960 970 980 990 1000
EPFTLEFLNS SRDLELLKMA NKHFFKPLLP GFHSHLTIPD AFFLKYIQGR
1010 1020 1030 1040 1050
NEQTMAKLRS DASKIIWEVK VEEDGQKLTD GWKEFALAHD LGVGDIAVFR
1060 1070 1080 1090 1100
QERYMAFHVT LLGPSCCEIQ YESCLDNENN LEKIEKKKKV KKNPRTRREA
1110 1120 1130 1140 1150
SSSLDPSCFV ANVSRATLRY DTLYFPTTFT RANSLDARCG EIVLLNEKGK
1160 1170 1180 1190 1200
SWTLALTQKK NGSFFIRRGW RSFCRANGLK AGGFYTFKLI QRGGTPVLRL
1210 1220 1230 1240 1250
SATESEEESS EEGDEIESLS TESESDEERN PEKIQRKKKV KKNPRREAES
1260 1270 1280 1290 1300
SSLDTSCFVA NVSPATLRYD TLNLPRPFVR ANGLDTRIGE IVLMNEKAGG
1310 1320 1330 1340 1350
FYTFKLILRG GTPVLRLLSE ETDEEECSVA DRIESLSTES ESDEESNQDE
1360 1370 1380 1390 1400
KSLKKRRSTW KASSSSSQNR LVTLTHTPNN LKKSILFLPV AFTRMHGINE
1410 1420 1430 1440 1450
ETQMTLLDKK GVNWSTNLRG EKIGDRIRLV GGWKEFFKAN SVKPGESVEF
1460
ELIWKEDTSC VLKFCPE
Length:1,467
Mass (Da):165,085
Last modified:October 29, 2014 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i3EAEE25549F7C03B
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A087GRX6A0A087GRX6_ARAAL
Uncharacterized protein
AALP_AA6G268100
1,403Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A087GRX5A0A087GRX5_ARAAL
Uncharacterized protein
AALP_AA6G268100
1,444Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
CM002874 Genomic DNA Translation: KFK32626.1

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM002874 Genomic DNA Translation: KFK32626.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

Phylogenomic databases

eggNOGiENOG502SK57, Eukaryota
OrthoDBi246503at2759

Family and domain databases

CDDicd10017, B3_DNA, 9 hits
Gene3Di2.40.330.10, 9 hits
InterProiView protein in InterPro
IPR003340, B3_DNA-bd
IPR015300, DNA-bd_pseudobarrel_sf
IPR039218, REM_fam
PANTHERiPTHR31674, PTHR31674, 13 hits
PfamiView protein in Pfam
PF02362, B3, 9 hits
SMARTiView protein in SMART
SM01019, B3, 10 hits
SUPFAMiSSF101936, SSF101936, 9 hits
PROSITEiView protein in PROSITE
PS50863, B3, 9 hits

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A087GRX4_ARAAL
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A087GRX4
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: October 29, 2014
Last sequence update: October 29, 2014
Last modified: August 12, 2020
This is version 31 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteomeImported
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