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Protein

50S ribosomal protein L13

Gene

rplM

Organism
Serratia marcescens
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.UniRule annotationSAAS annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotationSAAS annotationImported

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L13UniRule annotationSAAS annotation
Gene namesi
Name:rplMUniRule annotationImported
ORF Names:A8A12_12480Imported, AR325_24790Imported, BVG93_18930Imported, BVG97_19385Imported, C2M04_10335Imported, C3463_17060Imported, ERS381446_03491Imported, ERS381490_00861Imported
OrganismiSerratia marcescensImported
Taxonomic identifieri615 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesYersiniaceaeSerratia
Proteomesi
  • UP000198289 Componenti: Chromosome
  • UP000054899 Componenti: Unassembled WGS sequence
  • UP000236556 Componenti: Unassembled WGS sequence
  • UP000198428 Componenti: Chromosome
  • UP000185968 Componenti: Unassembled WGS sequence
  • UP000058492 Componenti: Chromosome
  • UP000055043 Componenti: Unassembled WGS sequence
  • UP000237173 Componenti: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.UniRule annotationSAAS annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL13 family.UniRule annotationSAAS annotation

Family and domain databases

CDDicd00392 Ribosomal_L13, 1 hit
Gene3Di3.90.1180.10, 1 hit
HAMAPiMF_01366 Ribosomal_L13, 1 hit
InterProiView protein in InterPro
IPR005822 Ribosomal_L13
IPR005823 Ribosomal_L13_bac-type
IPR023563 Ribosomal_L13_CS
IPR036899 Ribosomal_L13_sf
PANTHERiPTHR11545 PTHR11545, 1 hit
PfamiView protein in Pfam
PF00572 Ribosomal_L13, 1 hit
PIRSFiPIRSF002181 Ribosomal_L13, 1 hit
SUPFAMiSSF52161 SSF52161, 1 hit
TIGRFAMsiTIGR01066 rplM_bact, 1 hit
PROSITEiView protein in PROSITE
PS00783 RIBOSOMAL_L13, 1 hit

Sequencei

Sequence statusi: Complete.

A0A086FF20-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKTFTAKPET VKRDWYVVDA DGKTLGRLAT ELARRLRGKH KAEYTPHVDT
60 70 80 90 100
GDYIIVLNAD KVAVTGNKRT DKVYYHHTGH IGGIKQATFE EMIARRPERV
110 120 130 140
IEIAVKGMLP KGPLGRAMFR KLKVYAGTEH NHAAQQPQVL DI
Length:142
Mass (Da):16,020
Last modified:October 29, 2014 - v1
Checksum:i58BF5EE9EB75E12F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP013046 Genomic DNA Translation: ALL40017.1
CP018917 Genomic DNA Translation: ASL89626.1
CP018926 Genomic DNA Translation: ASM13879.1
FCGE01000004 Genomic DNA Translation: CUY60432.1
FCLD01000005 Genomic DNA Translation: CVG38933.1
LZOB01000019 Genomic DNA Translation: OKP50353.1
PPGF01000003 Genomic DNA Translation: PNU40564.1
PQOD01000004 Genomic DNA Translation: POX28388.1
RefSeqiWP_004937079.1, NZ_PQOK01000012.1

Genome annotation databases

EnsemblBacteriaiALL40017; ALL40017; AR325_24790
CUY60432; CUY60432; ERS381490_00861
CVE84072; CVE84072; ERS381432_02978
CVG38933; CVG38933; ERS381446_03491
KKZ18726; KKZ18726; AAY84_08395
OAH31915; OAH31915; AYJ10_19780
GeneIDi23389972
PATRICifig|615.101.peg.2243

Similar proteinsi

Entry informationi

Entry nameiA0A086FF20_SERMA
AccessioniPrimary (citable) accession number: A0A086FF20
Entry historyiIntegrated into UniProtKB/TrEMBL: October 29, 2014
Last sequence update: October 29, 2014
Last modified: July 18, 2018
This is version 39 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

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