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Protein
Submitted name:

Isochorismatase

Gene

dhbB

Organism
Bacillus mycoides
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>This subsection of the ‘Function’ section provides information relevant to cofactors. A cofactor is any non-protein substance required for a protein to be catalytically active. Some cofactors are inorganic, such as the metal atoms zinc, iron, and copper in various oxidation states. Others, such as most vitamins, are organic.<p><a href='/help/cofactor' target='_top'>More...</a></p>Cofactori

pantetheine 4'-phosphateUniRule annotationNote: Binds 1 phosphopantetheine covalently.UniRule annotation

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionHydrolaseImported

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
IsochorismataseImported (EC:3.3.2.1Imported)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:dhbBImported
ORF Names:AWW70_25415Imported, bcere0007_21520Imported, BG05_3689Imported, BW900_18350Imported, bwei_2664Imported, COL71_06000Imported, III_03122Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiBacillus mycoidesImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri1405 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillusBacillus cereus group
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000190696 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Unassembled WGS sequence
  • UP000001909 Componenti: Chromosome
  • UP000065797 Componenti: Unassembled WGS sequence
  • UP000031884 Componenti: Chromosome
  • UP000006976 Componenti: Unassembled WGS sequence
  • UP000030313 Componenti: Chromosome
  • UP000222321 Componenti: Unassembled WGS sequence

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei254O-(pantetheine 4'-phosphoryl)serineUniRule annotation1

Keywords - PTMi

PhosphopantetheineUniRule annotation, PhosphoproteinUniRule annotation

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini217 – 293CarrierInterPro annotationAdd BLAST77

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
COG1535 LUCA
COG3433 LUCA

KEGG Orthology (KO)

More...
KOi
K01252

Database of Orthologous Groups

More...
OrthoDBi
POG091H08X0

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
1.10.1200.10, 1 hit
3.40.50.850, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR036736 ACP-like_sf
IPR016291 Isochorismatase
IPR000868 Isochorismatase-like
IPR036380 Isochorismatase-like_sf
IPR009081 PP-bd_ACP

The PANTHER Classification System

More...
PANTHERi
PTHR43540:SF3 PTHR43540:SF3, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00857 Isochorismatase, 1 hit
PF00550 PP-binding, 1 hit

PIRSF; a whole-protein classification database

More...
PIRSFi
PIRSF001111 Isochorismatase, 1 hit

Protein Motif fingerprint database; a protein domain database

More...
PRINTSi
PR01398 ISCHRISMTASE

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF47336 SSF47336, 1 hit
SSF52499 SSF52499, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50075 CARRIER, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A0A084IZP5-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAIPSISVYK MPIESELPKN KVNWTPDPKR AVLLIHDMQE YFLDAYSDKE
60 70 80 90 100
SPKVELISNI KVIRERCKEL GIPVVYTAQP GGQTLEQRGL LQDFWGDGIP
110 120 130 140 150
AGPDKKKIVD ELTPDEDDIF LTKWRYSAFK KTNLLEILNE QGRDQLIICG
160 170 180 190 200
IYAHIGCLLT ACEAFMDGIE PFFVADAVAD FSLEHHKQAL QYASNRCAVT
210 220 230 240 250
TSTNLLLKDL QSVKSDESEG ITLQKVHELV AQLLREPVES IEVDEDLLNR
260 270 280 290
GLDSVRIMSL VEKWRREGKE ITFADLAERP TVDDWYRLLS SQAAQVL
Length:297
Mass (Da):33,679
Last modified:October 29, 2014 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iEC3FA976FDEDB930
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
CP009746 Genomic DNA Translation: AIW85290.1
CP009692 Genomic DNA Translation: AJH22376.1
ACLX01000058 Genomic DNA Translation: EEK73310.1
AHEV01000019 Genomic DNA Translation: EJR40006.1
LRPH01000093 Genomic DNA Translation: KWU54948.1
MUAI01000016 Genomic DNA Translation: OOR05300.1
NVGU01000003 Genomic DNA Translation: PGA15209.1

NCBI Reference Sequences

More...
RefSeqi
WP_002012770.1, NZ_NVGU01000003.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...
EnsemblBacteriai
AIW85290; AIW85290; bwei_2664
EEK73310; EEK73310; bcere0007_21520
EJR40006; EJR40006; III_03122
KEZ82179; KEZ82179; ER45_14750

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
29402692

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
bmyo:BG05_3689
bww:bwei_2664

Pathosystems Resource Integration Center (PATRIC)

More...
PATRICi
fig|1053227.3.peg.3181
fig|1405.16.peg.2379
fig|86662.17.peg.2687

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP009746 Genomic DNA Translation: AIW85290.1
CP009692 Genomic DNA Translation: AJH22376.1
ACLX01000058 Genomic DNA Translation: EEK73310.1
AHEV01000019 Genomic DNA Translation: EJR40006.1
LRPH01000093 Genomic DNA Translation: KWU54948.1
MUAI01000016 Genomic DNA Translation: OOR05300.1
NVGU01000003 Genomic DNA Translation: PGA15209.1
RefSeqiWP_002012770.1, NZ_NVGU01000003.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAIW85290; AIW85290; bwei_2664
EEK73310; EEK73310; bcere0007_21520
EJR40006; EJR40006; III_03122
KEZ82179; KEZ82179; ER45_14750
GeneIDi29402692
KEGGibmyo:BG05_3689
bww:bwei_2664
PATRICifig|1053227.3.peg.3181
fig|1405.16.peg.2379
fig|86662.17.peg.2687

Phylogenomic databases

eggNOGiCOG1535 LUCA
COG3433 LUCA
KOiK01252
OrthoDBiPOG091H08X0

Family and domain databases

Gene3Di1.10.1200.10, 1 hit
3.40.50.850, 1 hit
InterProiView protein in InterPro
IPR036736 ACP-like_sf
IPR016291 Isochorismatase
IPR000868 Isochorismatase-like
IPR036380 Isochorismatase-like_sf
IPR009081 PP-bd_ACP
PANTHERiPTHR43540:SF3 PTHR43540:SF3, 1 hit
PfamiView protein in Pfam
PF00857 Isochorismatase, 1 hit
PF00550 PP-binding, 1 hit
PIRSFiPIRSF001111 Isochorismatase, 1 hit
PRINTSiPR01398 ISCHRISMTASE
SUPFAMiSSF47336 SSF47336, 1 hit
SSF52499 SSF52499, 1 hit
PROSITEiView protein in PROSITE
PS50075 CARRIER, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A084IZP5_BACMY
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A084IZP5
Secondary accession number(s): A0A0B5SAH9, C2PVR6, J8IR53
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: October 29, 2014
Last sequence update: October 29, 2014
Last modified: November 7, 2018
This is version 31 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
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