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Protein
Submitted name:

BnaA09g45340D protein

Gene

BnaA09g45340D

Organism
Brassica napus (Rape)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi41 – 105HomeoboxPROSITE-ProRule annotationAdd BLAST65

GO - Molecular functioni

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
BnaA09g45340D proteinImported
Gene namesi
Name:BnaA09g45340DImported
ORF Names:GSBRNA2T00055136001Imported
OrganismiBrassica napus (Rape)Imported
Taxonomic identifieri3708 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeBrassiceaeBrassica
Proteomesi
  • UP000028999 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini39 – 104HomeoboxInterPro annotationAdd BLAST66

Keywords - Domaini

HomeoboxPROSITE-ProRule annotation

Family and domain databases

CDDicd00086 homeodomain, 1 hit
InterProiView protein in InterPro
IPR009057 Homeobox-like_sf
IPR001356 Homeobox_dom
PfamiView protein in Pfam
PF00046 Homeobox, 1 hit
SMARTiView protein in SMART
SM00389 HOX, 1 hit
SUPFAMiSSF46689 SSF46689, 1 hit
PROSITEiView protein in PROSITE
PS50071 HOMEOBOX_2, 1 hit

Sequencei

Sequence statusi: Complete.

A0A078HA42-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGYNKDLTSH TLAHHCNIND IRNDEQIIAG SEGKPKEREK YMHSRWNPTP
60 70 80 90 100
EQTMVLEKVY SSGTRTPTTQ QIQDIASKLQ KYGRIEGKNV FYWFQNHKSR
110 120 130 140 150
EKLKRRRGDQ QGVTAINNVH EESLNKDNAT ANKASSSVSR RRGDHRVIHT
160 170 180 190 200
RTSLSSSPTH PQKNNVDDGK REHYETGVKD EEATGQNQKN PIYTSEFKYH
210 220 230 240 250
LKVASKPSQE ADQQYTLNDD DDDEEEEEET RKSRTLDLFP VTENQETTGF
260 270
AETNTKPNQL YCNYCYYYEF MPLMN
Length:275
Mass (Da):31,962
Last modified:October 29, 2014 - v1
Checksum:i3ED1EC9F5EB39113
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
LK032321 Genomic DNA Translation: CDY33728.1
RefSeqiXP_013658359.1, XM_013802905.1
XP_013660339.1, XM_013804885.1
XP_013669453.1, XM_013813999.1
XP_013709792.1, XM_013854338.1

Genome annotation databases

EnsemblPlantsiCDY33728; CDY33728; GSBRNA2T00055136001
GrameneiCDY33728; CDY33728; GSBRNA2T00055136001

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
LK032321 Genomic DNA Translation: CDY33728.1
RefSeqiXP_013658359.1, XM_013802905.1
XP_013660339.1, XM_013804885.1
XP_013669453.1, XM_013813999.1
XP_013709792.1, XM_013854338.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiCDY33728; CDY33728; GSBRNA2T00055136001
GrameneiCDY33728; CDY33728; GSBRNA2T00055136001

Family and domain databases

CDDicd00086 homeodomain, 1 hit
InterProiView protein in InterPro
IPR009057 Homeobox-like_sf
IPR001356 Homeobox_dom
PfamiView protein in Pfam
PF00046 Homeobox, 1 hit
SMARTiView protein in SMART
SM00389 HOX, 1 hit
SUPFAMiSSF46689 SSF46689, 1 hit
PROSITEiView protein in PROSITE
PS50071 HOMEOBOX_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A078HA42_BRANA
AccessioniPrimary (citable) accession number: A0A078HA42
Entry historyiIntegrated into UniProtKB/TrEMBL: October 29, 2014
Last sequence update: October 29, 2014
Last modified: March 28, 2018
This is version 20 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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