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Entry version 65 (29 Sep 2021)
Sequence version 1 (01 Oct 2014)
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Protein
Submitted name:

(S)-ureidoglycine aminohydrolase

Gene

ylbA

Organism
Pseudomonas aeruginosa
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionHydrolaseImported

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
(S)-ureidoglycine aminohydrolaseImported (EC:3.5.3.26Imported)
Submitted name:
Allantoin catabolism proteinImported
Submitted name:
Ureidoglycine aminohydrolaseImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:ylbAImported
ORF Names:ALP65_00162Imported, CAZ10_06990Imported, CGU42_27595Imported, DY940_05375Imported, E4V10_05915Imported, ECC04_023335Imported, GNQ48_17325Imported, IPC116_05725Imported, IPC1295_19790Imported, IPC1316_17530Imported, IPC1323_15080Imported, IPC1598_14720Imported, IPC29_01455Imported, IPC614_19210Imported, IPC737_14015Imported, IPC90_25110Imported, NCTC12924_00343Imported, PA52Ts2_2167Imported, RW109_RW109_05033Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiPseudomonas aeruginosaImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri287 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000297460 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Unassembled WGS sequence
  • UP000502341 Componenti: Chromosome
  • UP000284767 Componenti: Unassembled WGS sequence
  • UP000356665 Componenti: Unassembled WGS sequence
  • UP000278438 Componenti: Unassembled WGS sequence
  • UP000297682 Componenti: Unassembled WGS sequence
  • UP000270834 Componenti: Unassembled WGS sequence
  • UP000194857 Componenti: Unassembled WGS sequence
  • UP000297361 Componenti: Unassembled WGS sequence
  • UP000433532 Componenti: Unassembled WGS sequence
  • UP000297845 Componenti: Unassembled WGS sequence
  • UP000298398 Componenti: Unassembled WGS sequence
  • UP000297376 Componenti: Unassembled WGS sequence
  • UP000233777 Componenti: Chromosome mainomosome
  • UP000276985 Componenti: Unassembled WGS sequence
  • UP000297353 Componenti: Unassembled WGS sequence
  • UP000216659 Componenti: Unassembled WGS sequence
  • UP000283921 Componenti: Unassembled WGS sequence
  • UP000284878 Componenti: Unassembled WGS sequence

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini72 – 141Cupin_2InterPro annotationAdd BLAST70
Domaini195 – 252Cupin_2InterPro annotationAdd BLAST58

Phylogenomic databases

Database of Orthologous Groups

More...
OrthoDBi
1139895at2

Family and domain databases

Conserved Domains Database

More...
CDDi
cd02212, cupin_UGlyAH_C, 1 hit
cd02211, cupin_UGlyAH_N, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
2.60.120.10, 2 hits

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR013096, Cupin_2
IPR014710, RmlC-like_jellyroll
IPR011051, RmlC_Cupin_sf
IPR017627, UGHY
IPR044697, UGlyAH_cupin_C
IPR044704, UGlyAH_cupin_N

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF07883, Cupin_2, 2 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF51182, SSF51182, 1 hit

TIGRFAMs; a protein family database

More...
TIGRFAMsi
TIGR03214, ura-cupin, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A0A072ZKM0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSKSSYYAPH GGHPAQTELL TDRAMFTEAY AVIPKGVMRD IVTSHLPFWD
60 70 80 90 100
NMRMWVIARP LSGFAETFSQ YIVELAPNGG SDKPEQDPNA EAVLFVVEGE
110 120 130 140 150
LSLTLQGQVH AMQPGGYAFI PPGADYKVRN TTGQHTRFHW IRKHYQKVDG
160 170 180 190 200
VPLPEAFVTN EQDIQPLVMP DTEGRWSTTR FVDMSDMRHD MHVNIVNFEP
210 220 230 240 250
GGVIPFAETH VMEHGLYVLE GKAVYRLNQD WVEVEAGDFM WLRAFCPQAC
260 270
YSGGPGRFRY LLYKDVNRHM RLTLNAPH
Length:278
Mass (Da):31,614
Last modified:October 1, 2014 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iC654F35DA34FFFC0
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
WOAD01000014 Genomic DNA Translation: MUI36769.1
NFFZ01000003 Genomic DNA Translation: OTI63958.1
NMRQ01000050 Genomic DNA Translation: OZO14907.1
CP051768 Genomic DNA Translation: QJE83571.1
RBSQ01000495 Genomic DNA Translation: RMS56755.1
NSNE01000012 Genomic DNA Translation: RPM12135.1
NSTV01000004 Genomic DNA Translation: RPW74878.1
NTAF01000016 Genomic DNA Translation: RQI08717.1
RXTL01000006 Genomic DNA Translation: RTS50548.1
LT969520 Genomic DNA Translation: SOV30911.1
RWLF01000005 Genomic DNA Translation: TEC11043.1
RWOM01000006 Genomic DNA Translation: TEH33952.1
RWOT01000007 Genomic DNA Translation: TEH69288.1
RWPT01000005 Genomic DNA Translation: TEJ62678.1
RWTJ01000002 Genomic DNA Translation: TEO98489.1
RWVG01000001 Genomic DNA Translation: TER84237.1
SRHR01000006 Genomic DNA Translation: TGA91116.1
RHMD02000002 Genomic DNA Translation: TGB22253.1
CABDUZ010000001 Genomic DNA Translation: VTL96954.1

NCBI Reference Sequences

More...
RefSeqi
WP_003086528.1, NZ_WYAF01000014.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...
EnsemblBacteriai
OTI63958; OTI63958; CAZ10_06990
OZO14907; OZO14907; CGU42_27595
RFJ77855; RFJ77855; DZ962_01505
SOV30911; SOV30911; RW109_RW109_05033

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
WOAD01000014 Genomic DNA Translation: MUI36769.1
NFFZ01000003 Genomic DNA Translation: OTI63958.1
NMRQ01000050 Genomic DNA Translation: OZO14907.1
CP051768 Genomic DNA Translation: QJE83571.1
RBSQ01000495 Genomic DNA Translation: RMS56755.1
NSNE01000012 Genomic DNA Translation: RPM12135.1
NSTV01000004 Genomic DNA Translation: RPW74878.1
NTAF01000016 Genomic DNA Translation: RQI08717.1
RXTL01000006 Genomic DNA Translation: RTS50548.1
LT969520 Genomic DNA Translation: SOV30911.1
RWLF01000005 Genomic DNA Translation: TEC11043.1
RWOM01000006 Genomic DNA Translation: TEH33952.1
RWOT01000007 Genomic DNA Translation: TEH69288.1
RWPT01000005 Genomic DNA Translation: TEJ62678.1
RWTJ01000002 Genomic DNA Translation: TEO98489.1
RWVG01000001 Genomic DNA Translation: TER84237.1
SRHR01000006 Genomic DNA Translation: TGA91116.1
RHMD02000002 Genomic DNA Translation: TGB22253.1
CABDUZ010000001 Genomic DNA Translation: VTL96954.1
RefSeqiWP_003086528.1, NZ_WYAF01000014.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Genome annotation databases

EnsemblBacteriaiOTI63958; OTI63958; CAZ10_06990
OZO14907; OZO14907; CGU42_27595
RFJ77855; RFJ77855; DZ962_01505
SOV30911; SOV30911; RW109_RW109_05033

Phylogenomic databases

OrthoDBi1139895at2

Family and domain databases

CDDicd02212, cupin_UGlyAH_C, 1 hit
cd02211, cupin_UGlyAH_N, 1 hit
Gene3Di2.60.120.10, 2 hits
InterProiView protein in InterPro
IPR013096, Cupin_2
IPR014710, RmlC-like_jellyroll
IPR011051, RmlC_Cupin_sf
IPR017627, UGHY
IPR044697, UGlyAH_cupin_C
IPR044704, UGlyAH_cupin_N
PfamiView protein in Pfam
PF07883, Cupin_2, 2 hits
SUPFAMiSSF51182, SSF51182, 1 hit
TIGRFAMsiTIGR03214, ura-cupin, 1 hit

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A072ZKM0_PSEAI
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A072ZKM0
Secondary accession number(s): A0A1S1C4C7
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: October 1, 2014
Last sequence update: October 1, 2014
Last modified: September 29, 2021
This is version 65 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)
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