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Protein
Submitted name:

Translation initiation factor rli1

Gene

LCOR_05664.1

Organism
Lichtheimia corymbifera JMRC:FSU:9682
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi110 – 117ATPPROSITE-ProRule annotation8
Nucleotide bindingi379 – 386ATPPROSITE-ProRule annotation8

GO - Molecular functioni

Keywordsi

Molecular functionInitiation factorImported
Biological processProtein biosynthesis
LigandATP-bindingPROSITE-ProRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
Translation initiation factor rli1Imported
Gene namesi
ORF Names:LCOR_05664.1Imported
OrganismiLichtheimia corymbifera JMRC:FSU:9682Imported
Taxonomic identifieri1263082 [NCBI]
Taxonomic lineageiEukaryotaFungiFungi incertae sedisMucoromycotaMucoromycotinaMucoromycetesMucoralesLichtheimiaceaeLichtheimia
Proteomesi
  • UP000027586 Componenti: Unassembled WGS sequence

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini7 – 404Fe-4S ferredoxin-typeInterPro annotationAdd BLAST34
Domaini46 – 754Fe-4S ferredoxin-typeInterPro annotationAdd BLAST30
Domaini70 – 315ABC transporterInterPro annotationAdd BLAST246
Domaini317 – 562ABC transporterInterPro annotationAdd BLAST246

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili187 – 207Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Family and domain databases

CDDicd03236 ABC_RNaseL_inhibitor_domain1, 1 hit
InterProiView protein in InterPro
IPR017896 4Fe4S_Fe-S-bd
IPR003593 AAA+_ATPase
IPR003439 ABC_transporter-like
IPR017871 ABC_transporter_CS
IPR027417 P-loop_NTPase
IPR013283 RLI1
IPR034348 RLI_dom_1
IPR007209 RNaseL-inhib_metal-bd_dom
PANTHERiPTHR19248 PTHR19248, 1 hit
PfamiView protein in Pfam
PF00005 ABC_tran, 2 hits
PF00037 Fer4, 1 hit
PF04068 RLI, 1 hit
PRINTSiPR01868 ABCEFAMILY
SMARTiView protein in SMART
SM00382 AAA, 2 hits
SUPFAMiSSF52540 SSF52540, 2 hits
PROSITEiView protein in PROSITE
PS51379 4FE4S_FER_2, 2 hits
PS00211 ABC_TRANSPORTER_1, 2 hits
PS50893 ABC_TRANSPORTER_2, 2 hits

Sequencei

Sequence statusi: Complete.

A0A068RXT2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSDKLTRIAI INADKCKPKK CRQECKKSCP VNRMGKFCIE VSPTSKIAFI
60 70 80 90 100
SETLCIGCGI CPKKCPFGAI NIINLPTNLE SEVTHRYSAN SFKLHRLPVP
110 120 130 140 150
RPGQVLGLVG TNGIGKSTAL KILSGKMKPN LGQFDNPPDW EDILKYFRGS
160 170 180 190 200
ELQNYFTKIL EDNLKAITKP QYVDHIPKVV NGKVGQLLED KMERNNLDEM
210 220 230 240 250
IDELELKGIM NREVGQLSGG ELQRFAIGVV AVQKANVYMF DEPSSYLDVK
260 270 280 290 300
QRLNAARVIR SLITAESYII VVEHDLSVLD YLSDYICILY GMPSVYGVVT
310 320 330 340 350
LPASVRDGIN IFLDGHIRTE NLRFRQESLT FKIVEQTDDA AVEKQRNYSY
360 370 380 390 400
PDMTKTLGDF KLEVKAGEFT DSEIVVMLGQ NGTGKTTFIR LLAGLLKPDG
410 420 430 440 450
GEGVPELNVS YKPQKISPKF KGTVRMLFIK KIKAAFLNPQ FQTDVVKPLS
460 470 480 490 500
IENILDQEVT HLSGGELQRV AIILALGQPA DIYLIDEPSA YLDSEQRIIA
510 520 530 540 550
AKVIKRFIVH FKRTAFIVEH DFIMATYLAD RVVVYEGQPS IHAIANTPQS
560 570 580 590
LLSGMNKFLA SLEITFRRDP TNYRPRINKY DSQMDQEQKA SGNYFFLEQ
Length:599
Mass (Da):67,352
Last modified:October 1, 2014 - v1
Checksum:iD355F7AE905F20DE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CBTN010000023 Genomic DNA Translation: CDH54417.1

Genome annotation databases

EnsemblFungiiCDH54417; CDH54417; LCOR_05664.1

Similar proteinsi

Entry informationi

Entry nameiA0A068RXT2_9FUNG
AccessioniPrimary (citable) accession number: A0A068RXT2
Entry historyiIntegrated into UniProtKB/TrEMBL: October 1, 2014
Last sequence update: October 1, 2014
Last modified: July 18, 2018
This is version 25 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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