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Entry version 26 (11 Dec. 2019)
Sequence version 1 (03 Sep. 2014)
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Protein
Submitted name:

Uncharacterized protein

Gene

JCGZ_25736

Organism
Jatropha curcas (Barbados nut)
Status
Unreviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section specifies the position and type of each DNA-binding domain present within the protein.<p><a href='/help/dna_bind' target='_top'>More...</a></p>DNA bindingi19 – 78HomeoboxPROSITE-ProRule annotationAdd BLAST60

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotation

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Uncharacterized proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:JCGZ_25736Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiJatropha curcas (Barbados nut)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri180498 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliopsidaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesEuphorbiaceaeCrotonoideaeJatropheaeJatropha
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000027138 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Unassembled WGS sequence

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotation

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini17 – 77HomeoboxInterPro annotationAdd BLAST61
Domaini551 – 610DDTInterPro annotationAdd BLAST60

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni1 – 28DisorderedSequence analysisAdd BLAST28
Regioni448 – 471DisorderedSequence analysisAdd BLAST24
Regioni832 – 871DisorderedSequence analysisAdd BLAST40
Regioni1543 – 1619DisorderedSequence analysisAdd BLAST77
Regioni1642 – 1772DisorderedSequence analysisAdd BLAST131

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and domains' section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili376 – 396Sequence analysisAdd BLAST21

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi833 – 855AcidicSequence analysisAdd BLAST23
Compositional biasi1551 – 1565BasicSequence analysisAdd BLAST15
Compositional biasi1566 – 1591PolarSequence analysisAdd BLAST26
Compositional biasi1598 – 1615BasicSequence analysisAdd BLAST18
Compositional biasi1654 – 1671PolarSequence analysisAdd BLAST18
Compositional biasi1705 – 1753AcidicSequence analysisAdd BLAST49
Compositional biasi1758 – 1772PolarSequence analysisAdd BLAST15

Keywords - Domaini

Coiled coilSequence analysis, HomeoboxPROSITE-ProRule annotation

Phylogenomic databases

Database of Orthologous Groups

More...
OrthoDBi
70733at2759

Family and domain databases

Conserved Domains Database

More...
CDDi
cd00086 homeodomain, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR018501 DDT_dom
IPR007759 HB1/Asxl_HTH
IPR009057 Homeobox-like_sf
IPR001356 Homeobox_dom
IPR028942 WHIM1_dom
IPR028941 WHIM2_dom

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF02791 DDT, 1 hit
PF05066 HARE-HTH, 1 hit
PF00046 Homeodomain, 1 hit
PF15612 WHIM1, 1 hit
PF15613 WSD, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00571 DDT, 1 hit
SM00389 HOX, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF46689 SSF46689, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50827 DDT, 1 hit
PS50071 HOMEOBOX_2, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A0A067JX12-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MDGSGGAADG EKKKPEGEVK SKRKMKTASQ LEILEKTYAV ETYPSESLRA
60 70 80 90 100
ELSVQLGLSD RQLQMWFCHR RLKDRKAPLV KRQPKDSPAP SGEDMGAVAE
110 120 130 140 150
VGNEHMLVPA SGTSPFGHGM DPRRVVARTP GVAVPRLAPE MSSVRRYYEP
160 170 180 190 200
QQSIAELRAI SFVEAQLGEP LREDGPILGM EFDPLPPDAF GAPIGTATLG
210 220 230 240 250
QQKQPGRSFE ASLYERLDAK SIKGTTRPVH EYQFLPQQPT VRADAYERVG
260 270 280 290 300
PSYQFGSPAD SHNTKSAALS AGRPLMHANE QMTSGYGFPS QLPSLNLMPP
310 320 330 340 350
EGRQGHLLPS ATTEYDTVLR KSSFTNVGGD AQIGSHPISV LDNPFMQSER
360 370 380 390 400
RVTHDEDVLR IERKRKSEEA RIAREVEAHE KRIRKELEKQ DILRRKREEQ
410 420 430 440 450
IRKEMERQDR ERRKEEERLL REKQREEERY QREQRRELER RERFLQKESM
460 470 480 490 500
RAEKMRQKEE QRREKEAARQ KAATERAIAR RIAKESMELV EDERLELMEL
510 520 530 540 550
AALSKGLPSI VSLDFETLQN LDSFRDKLAS FPPKSVILKR PFAIQPWNSS
560 570 580 590 600
EENVGNLLMV WRFLITFVDV LGIWPFTLDE FVQAFHDYDP RLLGEIHVAL
610 620 630 640 650
LRTIIKDIED VARTPASGLG ANQNSAANPG GGHPQIVEGA YAWGFDIRSW
660 670 680 690 700
QRYLNPLTWP EILRQFALSA GFGPQLKKRN VEQAYLRDDN EGNDGQDVIT
710 720 730 740 750
NLRSGAAVEN AVAIMRERGF SNQRRSRHRL TPGTVKFAAF HVLSLEGSKG
760 770 780 790 800
LTILEVAEKI QKSGLRDLTT SKTPEASIAA ALSRDSKLFE RTAPSTYCVR
810 820 830 840 850
PAYRKDPDDT EAILAAARER IRIFKSGFID GEDAEDAERD DDSESDVADD
860 870 880 890 900
PDVDDLGTDL NPKKEACSSP EANKFNAEEL FENGKENDEV ISTPQVGLQN
910 920 930 940 950
VGEGLSSMHS EVKGVRSSTG QSIDVAGVST NAEQQGADID ESNLGEPWVQ
960 970 980 990 1000
GLMEGEYSDL SVEERLNALV ALIGVAIEGN SIRVVLEERL EAANSLKKQM
1010 1020 1030 1040 1050
WAEAQLDKRR MKEEYITKIH FPFFTGNKVE PNLAMSIAEA RQSPLVTVDE
1060 1070 1080 1090 1100
KINEMPSNAA AQQEKSTDPQ NDINYLNTTE GNMQMQDFSV GPDNLPFHQS
1110 1120 1130 1140 1150
GHAAEKSRSQ LKSFIGHKAE EMYVYRSLPL GQDRRRNRYW QFITSASCND
1160 1170 1180 1190 1200
PGCGRIFVEL RDGRWRLIDS EQDFDSLLAS LDVRGVRESH LHMMLQKVEM
1210 1220 1230 1240 1250
SFKEAVRRNM LPANTGRQIG DTVKAEAADM VTGPDCGATI DSPSSTVCLA
1260 1270 1280 1290 1300
DSDMSDTSTS FAVELGRNEI EQNFALKRYQ DFEKWIWKEC CNSSVLCAVK
1310 1320 1330 1340 1350
YGKKRCRQLL SLCDYCYDIY FSEDDHCPSC HKPYKQSSSD FSFSKHVAHS
1360 1370 1380 1390 1400
EEKLRVGPAY NLRGSSSPLR IRLLKLQLAL IEVSVLPEAL QSVWTNGYRK
1410 1420 1430 1440 1450
SWGTNLQSSL TAEDLLQTLT FLEGSIKRDY LSSNFETTNE LLGSDDLSGV
1460 1470 1480 1490 1500
AANDSFRMEK VPLLPWLPRT TAAVALRVME FDSSISYTLH QKIESQKDRG
1510 1520 1530 1540 1550
SVDYIKLPSK FAIVKSTQDN EANETPHTTG LFQEENWADA GFSAVGRGRG
1560 1570 1580 1590 1600
NRGRGRGRIR GGKSQRRVTG SRSESVKRSM ATNNDRIGQV LSWKGQSRGR
1610 1620 1630 1640 1650
GGRKRGRRSI RSRQKTVKKT VGISSVANIP KQIIYDKAPR KLGRHDWNGD
1660 1670 1680 1690 1700
ETRFQEGTEN LSSSERSEYD VDNGQATGDE YDDMAVDDYS GGYNGKSDDL
1710 1720 1730 1740 1750
LEGSDYNVDA NEEEEEEDDD EGEDEDEDDQ ADLDVEGFIN GDSDEDDIRD
1760 1770
GEQNGDPDDI IGSTSSDFSD YK
Length:1,772
Mass (Da):199,005
Last modified:September 3, 2014 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i3E16EBBBEAF42BEF
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
KK915137 Genomic DNA Translation: KDP24079.1

NCBI Reference Sequences

More...
RefSeqi
XP_012088211.1, XM_012232821.1

Genome annotation databases

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
105646886

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
jcu:105646886

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KK915137 Genomic DNA Translation: KDP24079.1
RefSeqiXP_012088211.1, XM_012232821.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Genome annotation databases

GeneIDi105646886
KEGGijcu:105646886

Phylogenomic databases

OrthoDBi70733at2759

Family and domain databases

CDDicd00086 homeodomain, 1 hit
InterProiView protein in InterPro
IPR018501 DDT_dom
IPR007759 HB1/Asxl_HTH
IPR009057 Homeobox-like_sf
IPR001356 Homeobox_dom
IPR028942 WHIM1_dom
IPR028941 WHIM2_dom
PfamiView protein in Pfam
PF02791 DDT, 1 hit
PF05066 HARE-HTH, 1 hit
PF00046 Homeodomain, 1 hit
PF15612 WHIM1, 1 hit
PF15613 WSD, 1 hit
SMARTiView protein in SMART
SM00571 DDT, 1 hit
SM00389 HOX, 1 hit
SUPFAMiSSF46689 SSF46689, 1 hit
PROSITEiView protein in PROSITE
PS50827 DDT, 1 hit
PS50071 HOMEOBOX_2, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A067JX12_JATCU
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A067JX12
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: September 3, 2014
Last sequence update: September 3, 2014
Last modified: December 11, 2019
This is version 26 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteomeImported
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